Protein–RNA interactions for Protein: O75954

TSPAN9, Tetraspanin-9, humanhuman

Predictions only

Length 239 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9O75954 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TSPAN9O75954 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TSPAN9O75954 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
TSPAN9O75954 DUSP8P5-201ENST00000422884 1815 ntBASIC19.14■□□□□ 0.65
TSPAN9O75954 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN9O75954 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TSPAN9O75954 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN9O75954 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
TSPAN9O75954 LONRF2P2-201ENST00000439212 571 ntBASIC19.14■□□□□ 0.65
TSPAN9O75954 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN9O75954 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN9O75954 AL031848.2-201ENST00000607670 837 ntBASIC19.14■□□□□ 0.65
TSPAN9O75954 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN9O75954 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN9O75954 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.14■□□□□ 0.65
TSPAN9O75954 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN9O75954 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TSPAN9O75954 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN9O75954 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN9O75954 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN9O75954 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.13■□□□□ 0.65
TSPAN9O75954 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TSPAN9O75954 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN9O75954 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TSPAN9O75954 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN9O75954 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN9O75954 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TSPAN9O75954 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
TSPAN9O75954 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN9O75954 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN9O75954 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
TSPAN9O75954 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN9O75954 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN9O75954 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN9O75954 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TSPAN9O75954 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.12■□□□□ 0.65
TSPAN9O75954 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.12■□□□□ 0.65
TSPAN9O75954 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TSPAN9O75954 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TSPAN9O75954 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TSPAN9O75954 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.12■□□□□ 0.65
TSPAN9O75954 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TSPAN9O75954 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TSPAN9O75954 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TSPAN9O75954 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.12■□□□□ 0.65
TSPAN9O75954 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.12■□□□□ 0.65
TSPAN9O75954 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.12■□□□□ 0.65
TSPAN9O75954 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TSPAN9O75954 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TSPAN9O75954 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TSPAN9O75954 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TSPAN9O75954 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TSPAN9O75954 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TSPAN9O75954 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
TSPAN9O75954 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.11■□□□□ 0.65
TSPAN9O75954 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TSPAN9O75954 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.11■□□□□ 0.65
TSPAN9O75954 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TSPAN9O75954 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TSPAN9O75954 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TSPAN9O75954 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.11■□□□□ 0.65
TSPAN9O75954 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TSPAN9O75954 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TSPAN9O75954 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TSPAN9O75954 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TSPAN9O75954 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.1■□□□□ 0.65
TSPAN9O75954 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TSPAN9O75954 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TSPAN9O75954 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
TSPAN9O75954 AC007375.3-201ENST00000600936 2314 ntBASIC19.1■□□□□ 0.65
TSPAN9O75954 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TSPAN9O75954 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TSPAN9O75954 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TSPAN9O75954 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TSPAN9O75954 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.1■□□□□ 0.65
TSPAN9O75954 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TSPAN9O75954 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TSPAN9O75954 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TSPAN9O75954 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.1■□□□□ 0.65
TSPAN9O75954 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TSPAN9O75954 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TSPAN9O75954 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TSPAN9O75954 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.1■□□□□ 0.65
TSPAN9O75954 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.09■□□□□ 0.65
TSPAN9O75954 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TSPAN9O75954 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TSPAN9O75954 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TSPAN9O75954 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TSPAN9O75954 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
TSPAN9O75954 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TSPAN9O75954 GUSBP5-201ENST00000418136 578 ntBASIC19.09■□□□□ 0.65
TSPAN9O75954 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TSPAN9O75954 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.09■□□□□ 0.65
TSPAN9O75954 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TSPAN9O75954 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.09■□□□□ 0.65
TSPAN9O75954 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.09■□□□□ 0.65
TSPAN9O75954 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TSPAN9O75954 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TSPAN9O75954 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
TSPAN9O75954 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms