Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SNRNP200O75643 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SNRNP200O75643 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.64■■□□□ 1.05
SNRNP200O75643 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SNRNP200O75643 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SNRNP200O75643 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.63■■□□□ 1.05
SNRNP200O75643 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SNRNP200O75643 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SNRNP200O75643 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SNRNP200O75643 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SNRNP200O75643 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNRNP200O75643 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SNRNP200O75643 AC019069.1-201ENST00000610008 1333 ntBASIC21.62■■□□□ 1.05
SNRNP200O75643 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.62■■□□□ 1.05
SNRNP200O75643 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNRNP200O75643 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.62■■□□□ 1.05
SNRNP200O75643 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.62■■□□□ 1.05
SNRNP200O75643 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.62■■□□□ 1.05
SNRNP200O75643 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SNRNP200O75643 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.62■■□□□ 1.05
SNRNP200O75643 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
SNRNP200O75643 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SNRNP200O75643 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
SNRNP200O75643 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.61■■□□□ 1.05
SNRNP200O75643 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SNRNP200O75643 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SNRNP200O75643 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.61■■□□□ 1.05
SNRNP200O75643 AC099791.2-201ENST00000605725 427 ntBASIC21.61■■□□□ 1.05
SNRNP200O75643 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SNRNP200O75643 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.61■■□□□ 1.05
SNRNP200O75643 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SNRNP200O75643 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
SNRNP200O75643 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.61■■□□□ 1.05
SNRNP200O75643 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.61■■□□□ 1.05
SNRNP200O75643 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SNRNP200O75643 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.61■■□□□ 1.05
SNRNP200O75643 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.6■■□□□ 1.05
SNRNP200O75643 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SNRNP200O75643 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
SNRNP200O75643 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.6■■□□□ 1.05
SNRNP200O75643 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SNRNP200O75643 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
SNRNP200O75643 AC144652.1-201ENST00000609974 1624 ntBASIC21.6■■□□□ 1.05
SNRNP200O75643 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
SNRNP200O75643 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SNRNP200O75643 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SNRNP200O75643 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SNRNP200O75643 MIR638-201ENST00000385237 100 ntBASIC21.59■■□□□ 1.05
SNRNP200O75643 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.59■■□□□ 1.05
SNRNP200O75643 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SNRNP200O75643 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SNRNP200O75643 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SNRNP200O75643 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.59■■□□□ 1.05
SNRNP200O75643 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.59■■□□□ 1.05
SNRNP200O75643 SERBP1P1-201ENST00000396021 1160 ntBASIC21.59■■□□□ 1.05
SNRNP200O75643 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SNRNP200O75643 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SNRNP200O75643 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.59■■□□□ 1.05
SNRNP200O75643 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.58■■□□□ 1.05
SNRNP200O75643 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SNRNP200O75643 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SNRNP200O75643 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
SNRNP200O75643 AC024257.2-201ENST00000549699 147 ntBASIC21.58■■□□□ 1.05
SNRNP200O75643 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.58■■□□□ 1.05
SNRNP200O75643 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SNRNP200O75643 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.58■■□□□ 1.05
SNRNP200O75643 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SNRNP200O75643 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.58■■□□□ 1.05
SNRNP200O75643 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
SNRNP200O75643 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.04
SNRNP200O75643 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.58■■□□□ 1.04
SNRNP200O75643 AC106739.1-201ENST00000617035 715 ntBASIC21.58■■□□□ 1.04
SNRNP200O75643 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.58■■□□□ 1.04
SNRNP200O75643 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.58■■□□□ 1.04
SNRNP200O75643 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.57■■□□□ 1.04
SNRNP200O75643 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SNRNP200O75643 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SNRNP200O75643 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SNRNP200O75643 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SNRNP200O75643 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.57■■□□□ 1.04
SNRNP200O75643 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.57■■□□□ 1.04
SNRNP200O75643 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.57■■□□□ 1.04
SNRNP200O75643 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SNRNP200O75643 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.56■■□□□ 1.04
SNRNP200O75643 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNRNP200O75643 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNRNP200O75643 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNRNP200O75643 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.56■■□□□ 1.04
SNRNP200O75643 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.56■■□□□ 1.04
SNRNP200O75643 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SNRNP200O75643 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNRNP200O75643 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.56■■□□□ 1.04
SNRNP200O75643 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SNRNP200O75643 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNRNP200O75643 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SNRNP200O75643 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SNRNP200O75643 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.55■■□□□ 1.04
SNRNP200O75643 DUX4L19-201ENST00000557448 1267 ntBASIC21.55■■□□□ 1.04
SNRNP200O75643 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.55■■□□□ 1.04
SNRNP200O75643 AC241377.3-202ENST00000626088 1088 ntBASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms