Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PRAMEF11O60813 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.92■■□□□ 1.26
PRAMEF11O60813 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.92■■□□□ 1.26
PRAMEF11O60813 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.92■■□□□ 1.26
PRAMEF11O60813 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PRAMEF11O60813 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.92■■□□□ 1.26
PRAMEF11O60813 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
PRAMEF11O60813 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.92■■□□□ 1.26
PRAMEF11O60813 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PRAMEF11O60813 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.91■■□□□ 1.26
PRAMEF11O60813 AC079630.1-202ENST00000618127 1840 ntBASIC22.91■■□□□ 1.26
PRAMEF11O60813 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PRAMEF11O60813 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.91■■□□□ 1.26
PRAMEF11O60813 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.9■■□□□ 1.26
PRAMEF11O60813 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
PRAMEF11O60813 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PRAMEF11O60813 SRD5A1P1-201ENST00000442297 786 ntBASIC22.9■■□□□ 1.26
PRAMEF11O60813 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.9■■□□□ 1.26
PRAMEF11O60813 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
PRAMEF11O60813 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.9■■□□□ 1.26
PRAMEF11O60813 AC144652.1-201ENST00000609974 1624 ntBASIC22.9■■□□□ 1.26
PRAMEF11O60813 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.89■■□□□ 1.26
PRAMEF11O60813 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
PRAMEF11O60813 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.26
PRAMEF11O60813 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.89■■□□□ 1.25
PRAMEF11O60813 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.89■■□□□ 1.25
PRAMEF11O60813 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PRAMEF11O60813 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.89■■□□□ 1.25
PRAMEF11O60813 AC092068.2-201ENST00000590491 1708 ntBASIC22.88■■□□□ 1.25
PRAMEF11O60813 AL136116.3-201ENST00000402907 1138 ntBASIC22.88■■□□□ 1.25
PRAMEF11O60813 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.88■■□□□ 1.25
PRAMEF11O60813 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
PRAMEF11O60813 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.88■■□□□ 1.25
PRAMEF11O60813 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.88■■□□□ 1.25
PRAMEF11O60813 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
PRAMEF11O60813 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.88■■□□□ 1.25
PRAMEF11O60813 AC008406.3-201ENST00000620001 1374 ntBASIC22.88■■□□□ 1.25
PRAMEF11O60813 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PRAMEF11O60813 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.87■■□□□ 1.25
PRAMEF11O60813 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
PRAMEF11O60813 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PRAMEF11O60813 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.87■■□□□ 1.25
PRAMEF11O60813 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.87■■□□□ 1.25
PRAMEF11O60813 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PRAMEF11O60813 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
PRAMEF11O60813 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
PRAMEF11O60813 FP325331.1-202ENST00000623531 1380 ntBASIC22.87■■□□□ 1.25
PRAMEF11O60813 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
PRAMEF11O60813 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
PRAMEF11O60813 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PRAMEF11O60813 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PRAMEF11O60813 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PRAMEF11O60813 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
PRAMEF11O60813 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.86■■□□□ 1.25
PRAMEF11O60813 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PRAMEF11O60813 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
PRAMEF11O60813 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PRAMEF11O60813 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.86■■□□□ 1.25
PRAMEF11O60813 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PRAMEF11O60813 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PRAMEF11O60813 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PRAMEF11O60813 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.84■■□□□ 1.25
PRAMEF11O60813 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
PRAMEF11O60813 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PRAMEF11O60813 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PRAMEF11O60813 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PRAMEF11O60813 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
PRAMEF11O60813 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PRAMEF11O60813 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.84■■□□□ 1.25
PRAMEF11O60813 AC241377.3-202ENST00000626088 1088 ntBASIC22.84■■□□□ 1.25
PRAMEF11O60813 AC241585.3-202ENST00000628937 1088 ntBASIC22.84■■□□□ 1.25
PRAMEF11O60813 AC245100.8-202ENST00000629247 1058 ntBASIC22.84■■□□□ 1.25
PRAMEF11O60813 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.84■■□□□ 1.25
PRAMEF11O60813 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
PRAMEF11O60813 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PRAMEF11O60813 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
PRAMEF11O60813 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PRAMEF11O60813 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PRAMEF11O60813 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.83■■□□□ 1.25
PRAMEF11O60813 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
PRAMEF11O60813 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.83■■□□□ 1.25
PRAMEF11O60813 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.24
PRAMEF11O60813 LINC01529-204ENST00000636474 1715 ntBASIC22.82■■□□□ 1.24
PRAMEF11O60813 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PRAMEF11O60813 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.82■■□□□ 1.24
PRAMEF11O60813 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PRAMEF11O60813 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
PRAMEF11O60813 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
PRAMEF11O60813 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.82■■□□□ 1.24
PRAMEF11O60813 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
PRAMEF11O60813 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PRAMEF11O60813 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.82■■□□□ 1.24
PRAMEF11O60813 AC099791.2-201ENST00000605725 427 ntBASIC22.82■■□□□ 1.24
PRAMEF11O60813 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
PRAMEF11O60813 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
PRAMEF11O60813 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
PRAMEF11O60813 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PRAMEF11O60813 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PRAMEF11O60813 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PRAMEF11O60813 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms