Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TNFSF11O14788 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TNFSF11O14788 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.2■□□□□ 0.82
TNFSF11O14788 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TNFSF11O14788 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TNFSF11O14788 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TNFSF11O14788 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.2■□□□□ 0.82
TNFSF11O14788 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TNFSF11O14788 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.2■□□□□ 0.82
TNFSF11O14788 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TNFSF11O14788 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TNFSF11O14788 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.2■□□□□ 0.82
TNFSF11O14788 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.2■□□□□ 0.82
TNFSF11O14788 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
TNFSF11O14788 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TNFSF11O14788 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNFSF11O14788 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNFSF11O14788 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TNFSF11O14788 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNFSF11O14788 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNFSF11O14788 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TNFSF11O14788 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNFSF11O14788 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNFSF11O14788 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNFSF11O14788 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNFSF11O14788 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TNFSF11O14788 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TNFSF11O14788 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.18■□□□□ 0.82
TNFSF11O14788 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TNFSF11O14788 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.18■□□□□ 0.82
TNFSF11O14788 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.18■□□□□ 0.82
TNFSF11O14788 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TNFSF11O14788 AC099791.2-201ENST00000605725 427 ntBASIC20.18■□□□□ 0.82
TNFSF11O14788 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNFSF11O14788 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TNFSF11O14788 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TNFSF11O14788 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNFSF11O14788 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
TNFSF11O14788 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TNFSF11O14788 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
TNFSF11O14788 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNFSF11O14788 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNFSF11O14788 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.17■□□□□ 0.82
TNFSF11O14788 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.17■□□□□ 0.82
TNFSF11O14788 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.17■□□□□ 0.82
TNFSF11O14788 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.17■□□□□ 0.82
TNFSF11O14788 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
TNFSF11O14788 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNFSF11O14788 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.17■□□□□ 0.82
TNFSF11O14788 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TNFSF11O14788 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TNFSF11O14788 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TNFSF11O14788 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TNFSF11O14788 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TNFSF11O14788 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TNFSF11O14788 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.16■□□□□ 0.82
TNFSF11O14788 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TNFSF11O14788 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.16■□□□□ 0.82
TNFSF11O14788 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.16■□□□□ 0.82
TNFSF11O14788 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TNFSF11O14788 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TNFSF11O14788 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.16■□□□□ 0.82
TNFSF11O14788 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
TNFSF11O14788 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.15■□□□□ 0.82
TNFSF11O14788 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TNFSF11O14788 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TNFSF11O14788 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TNFSF11O14788 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.15■□□□□ 0.82
TNFSF11O14788 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TNFSF11O14788 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.14■□□□□ 0.82
TNFSF11O14788 AC079630.1-202ENST00000618127 1840 ntBASIC20.14■□□□□ 0.81
TNFSF11O14788 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.14■□□□□ 0.81
TNFSF11O14788 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNFSF11O14788 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TNFSF11O14788 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.14■□□□□ 0.81
TNFSF11O14788 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
TNFSF11O14788 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.14■□□□□ 0.81
TNFSF11O14788 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.14■□□□□ 0.81
TNFSF11O14788 AC241377.3-202ENST00000626088 1088 ntBASIC20.14■□□□□ 0.81
TNFSF11O14788 AC241585.3-202ENST00000628937 1088 ntBASIC20.14■□□□□ 0.81
TNFSF11O14788 AC245100.8-202ENST00000629247 1058 ntBASIC20.14■□□□□ 0.81
TNFSF11O14788 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNFSF11O14788 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
TNFSF11O14788 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNFSF11O14788 AC144652.1-201ENST00000609974 1624 ntBASIC20.13■□□□□ 0.81
TNFSF11O14788 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNFSF11O14788 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TNFSF11O14788 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.13■□□□□ 0.81
TNFSF11O14788 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNFSF11O14788 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNFSF11O14788 AC096631.2-201ENST00000436136 790 ntBASIC20.13■□□□□ 0.81
TNFSF11O14788 AC092171.4-201ENST00000609130 632 ntBASIC20.13■□□□□ 0.81
TNFSF11O14788 AC009086.3-201ENST00000623486 1008 ntBASIC20.13■□□□□ 0.81
TNFSF11O14788 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNFSF11O14788 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.13■□□□□ 0.81
TNFSF11O14788 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNFSF11O14788 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.13■□□□□ 0.81
TNFSF11O14788 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TNFSF11O14788 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.13■□□□□ 0.81
TNFSF11O14788 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms