Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPK2O00526 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
UPK2O00526 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UPK2O00526 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
UPK2O00526 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPK2O00526 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPK2O00526 AC103834.1-201ENST00000520383 144 ntBASIC18.04■□□□□ 0.48
UPK2O00526 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UPK2O00526 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPK2O00526 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.04■□□□□ 0.48
UPK2O00526 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UPK2O00526 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
UPK2O00526 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UPK2O00526 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.04■□□□□ 0.48
UPK2O00526 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
UPK2O00526 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UPK2O00526 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPK2O00526 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
UPK2O00526 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UPK2O00526 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPK2O00526 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPK2O00526 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UPK2O00526 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UPK2O00526 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPK2O00526 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
UPK2O00526 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPK2O00526 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPK2O00526 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
UPK2O00526 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.03■□□□□ 0.48
UPK2O00526 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPK2O00526 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.03■□□□□ 0.48
UPK2O00526 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
UPK2O00526 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UPK2O00526 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UPK2O00526 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
UPK2O00526 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UPK2O00526 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.02■□□□□ 0.48
UPK2O00526 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UPK2O00526 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UPK2O00526 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
UPK2O00526 YBX1P4-201ENST00000392794 808 ntBASIC18.02■□□□□ 0.48
UPK2O00526 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
UPK2O00526 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
UPK2O00526 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.02■□□□□ 0.47
UPK2O00526 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
UPK2O00526 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.01■□□□□ 0.47
UPK2O00526 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.01■□□□□ 0.47
UPK2O00526 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UPK2O00526 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.01■□□□□ 0.47
UPK2O00526 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UPK2O00526 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UPK2O00526 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
UPK2O00526 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UPK2O00526 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UPK2O00526 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UPK2O00526 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UPK2O00526 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
UPK2O00526 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UPK2O00526 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UPK2O00526 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
UPK2O00526 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18■□□□□ 0.47
UPK2O00526 KRT8P33-201ENST00000508125 1423 ntBASIC18■□□□□ 0.47
UPK2O00526 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UPK2O00526 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
UPK2O00526 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18■□□□□ 0.47
UPK2O00526 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18■□□□□ 0.47
UPK2O00526 AC103724.3-201ENST00000564481 992 ntBASIC18■□□□□ 0.47
UPK2O00526 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
UPK2O00526 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UPK2O00526 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPK2O00526 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPK2O00526 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.99■□□□□ 0.47
UPK2O00526 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.99■□□□□ 0.47
UPK2O00526 SNX5-217ENST00000606557 1087 ntBASIC17.99■□□□□ 0.47
UPK2O00526 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UPK2O00526 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.99■□□□□ 0.47
UPK2O00526 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
UPK2O00526 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.99■□□□□ 0.47
UPK2O00526 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.99■□□□□ 0.47
UPK2O00526 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UPK2O00526 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UPK2O00526 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
UPK2O00526 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPK2O00526 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPK2O00526 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.98■□□□□ 0.47
UPK2O00526 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
UPK2O00526 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPK2O00526 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
UPK2O00526 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
UPK2O00526 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPK2O00526 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPK2O00526 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPK2O00526 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPK2O00526 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
UPK2O00526 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC17.97■□□□□ 0.47
UPK2O00526 TK2-216ENST00000564917 1156 ntTSL 3 BASIC17.97■□□□□ 0.47
UPK2O00526 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.97■□□□□ 0.47
UPK2O00526 AC137630.3-201ENST00000607245 391 ntBASIC17.97■□□□□ 0.47
UPK2O00526 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC17.97■□□□□ 0.47
UPK2O00526 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms