Protein–RNA interactions for Protein: O00421

CCRL2, C-C chemokine receptor-like 2, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCRL2O00421 KRT18P10-201ENST00000388836 1287 ntBASIC20.16■□□□□ 0.82
CCRL2O00421 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCRL2O00421 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.16■□□□□ 0.82
CCRL2O00421 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCRL2O00421 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCRL2O00421 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCRL2O00421 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCRL2O00421 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCRL2O00421 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCRL2O00421 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCRL2O00421 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCRL2O00421 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.16■□□□□ 0.82
CCRL2O00421 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCRL2O00421 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.15■□□□□ 0.82
CCRL2O00421 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCRL2O00421 MIR639-201ENST00000384974 98 ntBASIC20.15■□□□□ 0.82
CCRL2O00421 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCRL2O00421 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.15■□□□□ 0.82
CCRL2O00421 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCRL2O00421 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCRL2O00421 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCRL2O00421 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CCRL2O00421 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CCRL2O00421 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCRL2O00421 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCRL2O00421 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCRL2O00421 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CCRL2O00421 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CCRL2O00421 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CCRL2O00421 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CCRL2O00421 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CCRL2O00421 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.14■□□□□ 0.81
CCRL2O00421 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCRL2O00421 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CCRL2O00421 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCRL2O00421 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCRL2O00421 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCRL2O00421 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CCRL2O00421 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.14■□□□□ 0.81
CCRL2O00421 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CCRL2O00421 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CCRL2O00421 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CCRL2O00421 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCRL2O00421 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCRL2O00421 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCRL2O00421 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCRL2O00421 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCRL2O00421 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.13■□□□□ 0.81
CCRL2O00421 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCRL2O00421 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCRL2O00421 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCRL2O00421 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.13■□□□□ 0.81
CCRL2O00421 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCRL2O00421 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCRL2O00421 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCRL2O00421 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.13■□□□□ 0.81
CCRL2O00421 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCRL2O00421 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.12■□□□□ 0.81
CCRL2O00421 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.12■□□□□ 0.81
CCRL2O00421 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.12■□□□□ 0.81
CCRL2O00421 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CCRL2O00421 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.12■□□□□ 0.81
CCRL2O00421 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CCRL2O00421 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCRL2O00421 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCRL2O00421 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCRL2O00421 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.11■□□□□ 0.81
CCRL2O00421 C11orf96-202ENST00000528572 1834 ntBASIC20.11■□□□□ 0.81
CCRL2O00421 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.11■□□□□ 0.81
CCRL2O00421 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCRL2O00421 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCRL2O00421 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.11■□□□□ 0.81
CCRL2O00421 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CCRL2O00421 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CCRL2O00421 AC092053.2-201ENST00000640557 1818 ntBASIC20.11■□□□□ 0.81
CCRL2O00421 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.11■□□□□ 0.81
CCRL2O00421 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCRL2O00421 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
CCRL2O00421 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.1■□□□□ 0.81
CCRL2O00421 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCRL2O00421 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCRL2O00421 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCRL2O00421 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCRL2O00421 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CCRL2O00421 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCRL2O00421 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CCRL2O00421 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCRL2O00421 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCRL2O00421 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.09■□□□□ 0.81
CCRL2O00421 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
CCRL2O00421 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.09■□□□□ 0.81
CCRL2O00421 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCRL2O00421 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCRL2O00421 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCRL2O00421 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CCRL2O00421 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.09■□□□□ 0.81
CCRL2O00421 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCRL2O00421 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCRL2O00421 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.08■□□□□ 0.81
CCRL2O00421 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms