Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TLR4O00206 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
TLR4O00206 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.16
TLR4O00206 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
TLR4O00206 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TLR4O00206 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
TLR4O00206 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TLR4O00206 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.32■■□□□ 1.16
TLR4O00206 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.32■■□□□ 1.16
TLR4O00206 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
TLR4O00206 ANKRD20A6P-201ENST00000618763 204 ntBASIC22.32■■□□□ 1.16
TLR4O00206 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.32■■□□□ 1.16
TLR4O00206 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.32■■□□□ 1.16
TLR4O00206 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TLR4O00206 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TLR4O00206 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TLR4O00206 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TLR4O00206 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TLR4O00206 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TLR4O00206 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.31■■□□□ 1.16
TLR4O00206 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TLR4O00206 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TLR4O00206 AC087623.3-201ENST00000607047 1098 ntBASIC22.31■■□□□ 1.16
TLR4O00206 pRNA.6-201ENST00000610482 90 ntBASIC22.31■■□□□ 1.16
TLR4O00206 pRNA.5-201ENST00000612139 90 ntBASIC22.31■■□□□ 1.16
TLR4O00206 pRNA.11-201ENST00000618423 90 ntBASIC22.31■■□□□ 1.16
TLR4O00206 pRNA.13-201ENST00000619112 90 ntBASIC22.31■■□□□ 1.16
TLR4O00206 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.3■■□□□ 1.16
TLR4O00206 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TLR4O00206 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
TLR4O00206 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.3■■□□□ 1.16
TLR4O00206 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.3■■□□□ 1.16
TLR4O00206 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
TLR4O00206 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
TLR4O00206 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.29■■□□□ 1.16
TLR4O00206 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.29■■□□□ 1.16
TLR4O00206 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
TLR4O00206 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TLR4O00206 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
TLR4O00206 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TLR4O00206 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
TLR4O00206 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.29■■□□□ 1.16
TLR4O00206 PARL-206ENST00000435888 1098 ntTSL 5 BASIC22.29■■□□□ 1.16
TLR4O00206 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.29■■□□□ 1.16
TLR4O00206 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.29■■□□□ 1.16
TLR4O00206 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TLR4O00206 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
TLR4O00206 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
TLR4O00206 JTB-203ENST00000368589 1216 ntTSL 2 BASIC22.28■■□□□ 1.16
TLR4O00206 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TLR4O00206 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
TLR4O00206 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TLR4O00206 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TLR4O00206 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.28■■□□□ 1.16
TLR4O00206 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.28■■□□□ 1.16
TLR4O00206 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.27■■□□□ 1.16
TLR4O00206 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TLR4O00206 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.27■■□□□ 1.16
TLR4O00206 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
TLR4O00206 AC141586.4-201ENST00000624558 1573 ntBASIC22.27■■□□□ 1.16
TLR4O00206 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
TLR4O00206 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
TLR4O00206 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
TLR4O00206 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TLR4O00206 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.26■■□□□ 1.15
TLR4O00206 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TLR4O00206 AC022211.4-201ENST00000625094 2161 ntBASIC22.25■■□□□ 1.15
TLR4O00206 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC22.25■■□□□ 1.15
TLR4O00206 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.25■■□□□ 1.15
TLR4O00206 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.25■■□□□ 1.15
TLR4O00206 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
TLR4O00206 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.25■■□□□ 1.15
TLR4O00206 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
TLR4O00206 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TLR4O00206 AP003733.4-201ENST00000623785 1697 ntBASIC22.24■■□□□ 1.15
TLR4O00206 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.24■■□□□ 1.15
TLR4O00206 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.24■■□□□ 1.15
TLR4O00206 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC22.24■■□□□ 1.15
TLR4O00206 AC126544.1-201ENST00000580842 1059 ntBASIC22.24■■□□□ 1.15
TLR4O00206 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TLR4O00206 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.24■■□□□ 1.15
TLR4O00206 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
TLR4O00206 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.23■■□□□ 1.15
TLR4O00206 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TLR4O00206 AL162430.1-201ENST00000480705 870 ntBASIC22.23■■□□□ 1.15
TLR4O00206 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TLR4O00206 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
TLR4O00206 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.23■■□□□ 1.15
TLR4O00206 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.23■■□□□ 1.15
TLR4O00206 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TLR4O00206 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TLR4O00206 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.22■■□□□ 1.15
TLR4O00206 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
TLR4O00206 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TLR4O00206 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TLR4O00206 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.22■■□□□ 1.15
TLR4O00206 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.22■■□□□ 1.15
TLR4O00206 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TLR4O00206 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
TLR4O00206 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms