Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
TMEM256-PLSCR3K7ERE1 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC14.26□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC14.26□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC14.26□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC14.26□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC14.26□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC14.26□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC14.25□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC14.25□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 C11orf96-202ENST00000528572 1834 ntBASIC14.25□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC14.24□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC14.24□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC14.23□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 AL359258.2-201ENST00000564063 1566 ntBASIC14.23□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 AC092053.2-201ENST00000640557 1818 ntBASIC14.23□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC14.23□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 CIB2-204ENST00000557846 934 ntTSL 3 BASIC14.23□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC14.22□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TMEM256-PLSCR3K7ERE1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
TMEM256-PLSCR3K7ERE1 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
TMEM256-PLSCR3K7ERE1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM256-PLSCR3K7ERE1 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM256-PLSCR3K7ERE1 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TMEM256-PLSCR3K7ERE1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms