Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TRAV26-1A0A087WT03 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TRAV26-1A0A087WT03 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV26-1A0A087WT03 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV26-1A0A087WT03 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TRAV26-1A0A087WT03 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV26-1A0A087WT03 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAV26-1A0A087WT03 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC16.12■□□□□ 0.17
TRAV26-1A0A087WT03 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV26-1A0A087WT03 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC16.11■□□□□ 0.17
TRAV26-1A0A087WT03 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAV26-1A0A087WT03 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV26-1A0A087WT03 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV26-1A0A087WT03 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAV26-1A0A087WT03 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV26-1A0A087WT03 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV26-1A0A087WT03 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV26-1A0A087WT03 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV26-1A0A087WT03 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRAV26-1A0A087WT03 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV26-1A0A087WT03 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRAV26-1A0A087WT03 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV26-1A0A087WT03 CD37-213ENST00000598095 1598 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV26-1A0A087WT03 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV26-1A0A087WT03 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
TRAV26-1A0A087WT03 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV26-1A0A087WT03 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV26-1A0A087WT03 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
TRAV26-1A0A087WT03 GRAMD4P7-201ENST00000578182 1232 ntBASIC16.1■□□□□ 0.17
TRAV26-1A0A087WT03 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRAV26-1A0A087WT03 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV26-1A0A087WT03 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV26-1A0A087WT03 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV26-1A0A087WT03 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV26-1A0A087WT03 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV26-1A0A087WT03 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV26-1A0A087WT03 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV26-1A0A087WT03 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV26-1A0A087WT03 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV26-1A0A087WT03 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAV26-1A0A087WT03 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV26-1A0A087WT03 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAV26-1A0A087WT03 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRAV26-1A0A087WT03 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV26-1A0A087WT03 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC16.09■□□□□ 0.17
TRAV26-1A0A087WT03 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAV26-1A0A087WT03 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAV26-1A0A087WT03 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAV26-1A0A087WT03 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV26-1A0A087WT03 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC16.09■□□□□ 0.17
TRAV26-1A0A087WT03 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV26-1A0A087WT03 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TRAV26-1A0A087WT03 PREB-202ENST00000406567 1910 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAV26-1A0A087WT03 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV26-1A0A087WT03 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAV26-1A0A087WT03 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV26-1A0A087WT03 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV26-1A0A087WT03 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV26-1A0A087WT03 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV26-1A0A087WT03 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV26-1A0A087WT03 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV26-1A0A087WT03 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV26-1A0A087WT03 AL356441.2-201ENST00000443009 864 ntBASIC16.08■□□□□ 0.16
TRAV26-1A0A087WT03 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAV26-1A0A087WT03 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TRAV26-1A0A087WT03 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV26-1A0A087WT03 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV26-1A0A087WT03 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV26-1A0A087WT03 AL391422.3-201ENST00000603791 2761 ntBASIC16.08■□□□□ 0.16
TRAV26-1A0A087WT03 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAV26-1A0A087WT03 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV26-1A0A087WT03 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV26-1A0A087WT03 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV26-1A0A087WT03 CASK-201ENST00000378154 2494 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV26-1A0A087WT03 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TRAV26-1A0A087WT03 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV26-1A0A087WT03 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV26-1A0A087WT03 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV26-1A0A087WT03 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV26-1A0A087WT03 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC16.07■□□□□ 0.16
TRAV26-1A0A087WT03 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC16.07■□□□□ 0.16
TRAV26-1A0A087WT03 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
TRAV26-1A0A087WT03 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TRAV26-1A0A087WT03 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV26-1A0A087WT03 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV26-1A0A087WT03 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV26-1A0A087WT03 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV26-1A0A087WT03 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV26-1A0A087WT03 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV26-1A0A087WT03 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV26-1A0A087WT03 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV26-1A0A087WT03 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV26-1A0A087WT03 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV26-1A0A087WT03 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV26-1A0A087WT03 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC16.06■□□□□ 0.16
TRAV26-1A0A087WT03 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRAV26-1A0A087WT03 MIR6722-201ENST00000617286 78 ntBASIC16.06■□□□□ 0.16
TRAV26-1A0A087WT03 EXOG-217ENST00000630638 197 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV26-1A0A087WT03 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV26-1A0A087WT03 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms