Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV9-2A0A087WT02 AC133552.2-201ENST00000619106 1032 ntBASIC16.63■□□□□ 0.25
TRAV9-2A0A087WT02 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAV9-2A0A087WT02 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV9-2A0A087WT02 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
TRAV9-2A0A087WT02 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV9-2A0A087WT02 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV9-2A0A087WT02 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV9-2A0A087WT02 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV9-2A0A087WT02 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV9-2A0A087WT02 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV9-2A0A087WT02 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TRAV9-2A0A087WT02 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TRAV9-2A0A087WT02 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV9-2A0A087WT02 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TRAV9-2A0A087WT02 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TRAV9-2A0A087WT02 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV9-2A0A087WT02 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV9-2A0A087WT02 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV9-2A0A087WT02 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TRAV9-2A0A087WT02 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV9-2A0A087WT02 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC16.62■□□□□ 0.25
TRAV9-2A0A087WT02 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV9-2A0A087WT02 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TRAV9-2A0A087WT02 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV9-2A0A087WT02 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV9-2A0A087WT02 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV9-2A0A087WT02 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV9-2A0A087WT02 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV9-2A0A087WT02 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.62■□□□□ 0.25
TRAV9-2A0A087WT02 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TRAV9-2A0A087WT02 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV9-2A0A087WT02 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TRAV9-2A0A087WT02 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV9-2A0A087WT02 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TRAV9-2A0A087WT02 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
TRAV9-2A0A087WT02 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV9-2A0A087WT02 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TRAV9-2A0A087WT02 AC093536.1-201ENST00000569153 554 ntBASIC16.61■□□□□ 0.25
TRAV9-2A0A087WT02 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV9-2A0A087WT02 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV9-2A0A087WT02 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV9-2A0A087WT02 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
TRAV9-2A0A087WT02 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TRAV9-2A0A087WT02 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TRAV9-2A0A087WT02 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV9-2A0A087WT02 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV9-2A0A087WT02 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV9-2A0A087WT02 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV9-2A0A087WT02 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV9-2A0A087WT02 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAV9-2A0A087WT02 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV9-2A0A087WT02 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAV9-2A0A087WT02 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TRAV9-2A0A087WT02 AC012354.3-201ENST00000623734 483 ntBASIC16.6■□□□□ 0.25
TRAV9-2A0A087WT02 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
TRAV9-2A0A087WT02 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TRAV9-2A0A087WT02 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV9-2A0A087WT02 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV9-2A0A087WT02 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV9-2A0A087WT02 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV9-2A0A087WT02 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV9-2A0A087WT02 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV9-2A0A087WT02 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV9-2A0A087WT02 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV9-2A0A087WT02 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TRAV9-2A0A087WT02 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV9-2A0A087WT02 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV9-2A0A087WT02 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC16.59■□□□□ 0.25
TRAV9-2A0A087WT02 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV9-2A0A087WT02 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV9-2A0A087WT02 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV9-2A0A087WT02 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
TRAV9-2A0A087WT02 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
TRAV9-2A0A087WT02 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC16.58■□□□□ 0.25
TRAV9-2A0A087WT02 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV9-2A0A087WT02 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV9-2A0A087WT02 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC16.58■□□□□ 0.24
TRAV9-2A0A087WT02 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
TRAV9-2A0A087WT02 U85056.1-201ENST00000616429 682 ntBASIC16.58■□□□□ 0.24
TRAV9-2A0A087WT02 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV9-2A0A087WT02 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV9-2A0A087WT02 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC16.58■□□□□ 0.24
TRAV9-2A0A087WT02 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV9-2A0A087WT02 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV9-2A0A087WT02 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TRAV9-2A0A087WT02 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TRAV9-2A0A087WT02 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRAV9-2A0A087WT02 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV9-2A0A087WT02 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV9-2A0A087WT02 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV9-2A0A087WT02 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV9-2A0A087WT02 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV9-2A0A087WT02 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV9-2A0A087WT02 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV9-2A0A087WT02 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TRAV9-2A0A087WT02 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV9-2A0A087WT02 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TRAV9-2A0A087WT02 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV9-2A0A087WT02 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms