Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV9-1A0A075B6T8 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV9-1A0A075B6T8 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC16.92■□□□□ 0.3
TRAV9-1A0A075B6T8 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV9-1A0A075B6T8 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV9-1A0A075B6T8 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV9-1A0A075B6T8 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
TRAV9-1A0A075B6T8 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV9-1A0A075B6T8 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV9-1A0A075B6T8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV9-1A0A075B6T8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV9-1A0A075B6T8 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV9-1A0A075B6T8 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV9-1A0A075B6T8 CIB2-204ENST00000557846 934 ntTSL 3 BASIC16.91■□□□□ 0.3
TRAV9-1A0A075B6T8 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV9-1A0A075B6T8 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TRAV9-1A0A075B6T8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV9-1A0A075B6T8 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV9-1A0A075B6T8 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV9-1A0A075B6T8 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV9-1A0A075B6T8 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV9-1A0A075B6T8 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV9-1A0A075B6T8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV9-1A0A075B6T8 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC16.9■□□□□ 0.3
TRAV9-1A0A075B6T8 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV9-1A0A075B6T8 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV9-1A0A075B6T8 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TRAV9-1A0A075B6T8 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV9-1A0A075B6T8 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TRAV9-1A0A075B6T8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV9-1A0A075B6T8 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
TRAV9-1A0A075B6T8 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
TRAV9-1A0A075B6T8 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV9-1A0A075B6T8 MIR219A2-201ENST00000608502 1504 ntBASIC16.9■□□□□ 0.3
TRAV9-1A0A075B6T8 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV9-1A0A075B6T8 H19-210ENST00000439725 1929 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAV9-1A0A075B6T8 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.9■□□□□ 0.3
TRAV9-1A0A075B6T8 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRAV9-1A0A075B6T8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRAV9-1A0A075B6T8 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC16.89■□□□□ 0.3
TRAV9-1A0A075B6T8 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
TRAV9-1A0A075B6T8 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRAV9-1A0A075B6T8 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRAV9-1A0A075B6T8 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.89■□□□□ 0.3
TRAV9-1A0A075B6T8 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV9-1A0A075B6T8 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV9-1A0A075B6T8 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC16.89■□□□□ 0.29
TRAV9-1A0A075B6T8 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC16.89■□□□□ 0.29
TRAV9-1A0A075B6T8 AC148477.6-201ENST00000623746 465 ntBASIC16.89■□□□□ 0.29
TRAV9-1A0A075B6T8 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TRAV9-1A0A075B6T8 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.89■□□□□ 0.29
TRAV9-1A0A075B6T8 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TRAV9-1A0A075B6T8 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV9-1A0A075B6T8 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV9-1A0A075B6T8 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV9-1A0A075B6T8 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.89■□□□□ 0.29
TRAV9-1A0A075B6T8 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV9-1A0A075B6T8 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TRAV9-1A0A075B6T8 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.88■□□□□ 0.29
TRAV9-1A0A075B6T8 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TRAV9-1A0A075B6T8 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.88■□□□□ 0.29
TRAV9-1A0A075B6T8 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRAV9-1A0A075B6T8 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV9-1A0A075B6T8 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV9-1A0A075B6T8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC16.88■□□□□ 0.29
TRAV9-1A0A075B6T8 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV9-1A0A075B6T8 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV9-1A0A075B6T8 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV9-1A0A075B6T8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.88■□□□□ 0.29
TRAV9-1A0A075B6T8 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC16.88■□□□□ 0.29
TRAV9-1A0A075B6T8 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV9-1A0A075B6T8 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV9-1A0A075B6T8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV9-1A0A075B6T8 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV9-1A0A075B6T8 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV9-1A0A075B6T8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV9-1A0A075B6T8 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC16.87■□□□□ 0.29
TRAV9-1A0A075B6T8 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV9-1A0A075B6T8 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV9-1A0A075B6T8 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV9-1A0A075B6T8 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRAV9-1A0A075B6T8 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV9-1A0A075B6T8 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC16.87■□□□□ 0.29
TRAV9-1A0A075B6T8 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV9-1A0A075B6T8 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV9-1A0A075B6T8 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRAV9-1A0A075B6T8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TRAV9-1A0A075B6T8 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TRAV9-1A0A075B6T8 LINC01521-201ENST00000504184 1943 ntBASIC16.86■□□□□ 0.29
TRAV9-1A0A075B6T8 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TRAV9-1A0A075B6T8 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV9-1A0A075B6T8 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV9-1A0A075B6T8 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TRAV9-1A0A075B6T8 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV9-1A0A075B6T8 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV9-1A0A075B6T8 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAV9-1A0A075B6T8 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TRAV9-1A0A075B6T8 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV9-1A0A075B6T8 AC008813.1-201ENST00000536597 885 ntBASIC16.86■□□□□ 0.29
TRAV9-1A0A075B6T8 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms