Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV6A0A075B6T7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV6A0A075B6T7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.24■□□□□ 0.67
TRAV6A0A075B6T7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV6A0A075B6T7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV6A0A075B6T7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.23■□□□□ 0.67
TRAV6A0A075B6T7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.23■□□□□ 0.67
TRAV6A0A075B6T7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV6A0A075B6T7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV6A0A075B6T7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV6A0A075B6T7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV6A0A075B6T7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TRAV6A0A075B6T7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.23■□□□□ 0.67
TRAV6A0A075B6T7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
TRAV6A0A075B6T7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV6A0A075B6T7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV6A0A075B6T7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TRAV6A0A075B6T7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.22■□□□□ 0.67
TRAV6A0A075B6T7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.22■□□□□ 0.67
TRAV6A0A075B6T7 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.22■□□□□ 0.67
TRAV6A0A075B6T7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV6A0A075B6T7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV6A0A075B6T7 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV6A0A075B6T7 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.22■□□□□ 0.67
TRAV6A0A075B6T7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.22■□□□□ 0.67
TRAV6A0A075B6T7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV6A0A075B6T7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV6A0A075B6T7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
TRAV6A0A075B6T7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.21■□□□□ 0.67
TRAV6A0A075B6T7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV6A0A075B6T7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.21■□□□□ 0.67
TRAV6A0A075B6T7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV6A0A075B6T7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV6A0A075B6T7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV6A0A075B6T7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.21■□□□□ 0.67
TRAV6A0A075B6T7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV6A0A075B6T7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TRAV6A0A075B6T7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.2■□□□□ 0.66
TRAV6A0A075B6T7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV6A0A075B6T7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV6A0A075B6T7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV6A0A075B6T7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV6A0A075B6T7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV6A0A075B6T7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV6A0A075B6T7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.2■□□□□ 0.66
TRAV6A0A075B6T7 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.2■□□□□ 0.66
TRAV6A0A075B6T7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV6A0A075B6T7 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.2■□□□□ 0.66
TRAV6A0A075B6T7 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV6A0A075B6T7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TRAV6A0A075B6T7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAV6A0A075B6T7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAV6A0A075B6T7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV6A0A075B6T7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAV6A0A075B6T7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.2■□□□□ 0.66
TRAV6A0A075B6T7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV6A0A075B6T7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV6A0A075B6T7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.19■□□□□ 0.66
TRAV6A0A075B6T7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV6A0A075B6T7 AC092053.2-201ENST00000640557 1818 ntBASIC19.19■□□□□ 0.66
TRAV6A0A075B6T7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV6A0A075B6T7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV6A0A075B6T7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.19■□□□□ 0.66
TRAV6A0A075B6T7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.19■□□□□ 0.66
TRAV6A0A075B6T7 AC021231.2-201ENST00000594613 730 ntBASIC19.19■□□□□ 0.66
TRAV6A0A075B6T7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV6A0A075B6T7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TRAV6A0A075B6T7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV6A0A075B6T7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV6A0A075B6T7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV6A0A075B6T7 AC026310.3-201ENST00000625186 2373 ntBASIC19.19■□□□□ 0.66
TRAV6A0A075B6T7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV6A0A075B6T7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV6A0A075B6T7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
TRAV6A0A075B6T7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
TRAV6A0A075B6T7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV6A0A075B6T7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.18■□□□□ 0.66
TRAV6A0A075B6T7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TRAV6A0A075B6T7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV6A0A075B6T7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TRAV6A0A075B6T7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV6A0A075B6T7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TRAV6A0A075B6T7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV6A0A075B6T7 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV6A0A075B6T7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV6A0A075B6T7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV6A0A075B6T7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV6A0A075B6T7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
TRAV6A0A075B6T7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
TRAV6A0A075B6T7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV6A0A075B6T7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV6A0A075B6T7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV6A0A075B6T7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV6A0A075B6T7 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV6A0A075B6T7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV6A0A075B6T7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TRAV6A0A075B6T7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV6A0A075B6T7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV6A0A075B6T7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV6A0A075B6T7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms