Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 RN7SL128P-201ENST00000467883 305 ntBASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 AC026410.1-201ENST00000507366 1101 ntBASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 BAK1P2-201ENST00000532665 631 ntBASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SYNPO2Q9UMS6 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SYNPO2Q9UMS6 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
SYNPO2Q9UMS6 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SYNPO2Q9UMS6 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SYNPO2Q9UMS6 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SYNPO2Q9UMS6 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.02■□□□□ 0.16
SYNPO2Q9UMS6 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SYNPO2Q9UMS6 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC16.02■□□□□ 0.16
SYNPO2Q9UMS6 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC16.02■□□□□ 0.16
SYNPO2Q9UMS6 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.02■□□□□ 0.16
SYNPO2Q9UMS6 MST1P2-201ENST00000457982 2291 ntBASIC16.02■□□□□ 0.16
SYNPO2Q9UMS6 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC16.02■□□□□ 0.16
SYNPO2Q9UMS6 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.02■□□□□ 0.16
SYNPO2Q9UMS6 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
SYNPO2Q9UMS6 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
SYNPO2Q9UMS6 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SYNPO2Q9UMS6 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SYNPO2Q9UMS6 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC16.02■□□□□ 0.16
SYNPO2Q9UMS6 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC16.02■□□□□ 0.16
SYNPO2Q9UMS6 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
SYNPO2Q9UMS6 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
SYNPO2Q9UMS6 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SYNPO2Q9UMS6 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SYNPO2Q9UMS6 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC16.02■□□□□ 0.16
SYNPO2Q9UMS6 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SYNPO2Q9UMS6 SNU13-204ENST00000402458 462 ntTSL 3 BASIC16.02■□□□□ 0.16
SYNPO2Q9UMS6 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC16.02■□□□□ 0.16
SYNPO2Q9UMS6 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC16.02■□□□□ 0.16
SYNPO2Q9UMS6 AP000244.1-201ENST00000424582 201 ntBASIC16.02■□□□□ 0.16
SYNPO2Q9UMS6 NALT1-202ENST00000450304 437 ntTSL 3 BASIC16.02■□□□□ 0.16
SYNPO2Q9UMS6 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC16.02■□□□□ 0.16
SYNPO2Q9UMS6 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC16.02■□□□□ 0.16
SYNPO2Q9UMS6 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC16.02■□□□□ 0.16
SYNPO2Q9UMS6 AP005264.6-204ENST00000588436 719 ntBASIC16.02■□□□□ 0.16
SYNPO2Q9UMS6 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC16.02■□□□□ 0.16
SYNPO2Q9UMS6 AC244250.3-201ENST00000620749 366 ntBASIC16.02■□□□□ 0.16
SYNPO2Q9UMS6 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC16.02■□□□□ 0.16
SYNPO2Q9UMS6 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.02■□□□□ 0.16
SYNPO2Q9UMS6 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SYNPO2Q9UMS6 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SYNPO2Q9UMS6 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC16.02■□□□□ 0.15
SYNPO2Q9UMS6 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SYNPO2Q9UMS6 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
SYNPO2Q9UMS6 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SYNPO2Q9UMS6 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SYNPO2Q9UMS6 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
SYNPO2Q9UMS6 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SYNPO2Q9UMS6 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
SYNPO2Q9UMS6 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
SYNPO2Q9UMS6 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
SYNPO2Q9UMS6 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
SYNPO2Q9UMS6 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYNPO2Q9UMS6 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYNPO2Q9UMS6 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYNPO2Q9UMS6 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.01■□□□□ 0.15
SYNPO2Q9UMS6 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SYNPO2Q9UMS6 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYNPO2Q9UMS6 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYNPO2Q9UMS6 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SYNPO2Q9UMS6 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYNPO2Q9UMS6 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
SYNPO2Q9UMS6 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
SYNPO2Q9UMS6 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYNPO2Q9UMS6 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYNPO2Q9UMS6 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
SYNPO2Q9UMS6 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC16.01■□□□□ 0.15
SYNPO2Q9UMS6 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC16.01■□□□□ 0.15
SYNPO2Q9UMS6 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC16.01■□□□□ 0.15
SYNPO2Q9UMS6 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC16.01■□□□□ 0.15
SYNPO2Q9UMS6 KRT18P46-201ENST00000435568 1279 ntBASIC16.01■□□□□ 0.15
SYNPO2Q9UMS6 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms