Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLIP2Q9UDT6 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC16.82■□□□□ 0.28
CLIP2Q9UDT6 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CLIP2Q9UDT6 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 KRT8P31-201ENST00000504812 1408 ntBASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 MIR557-201ENST00000385239 98 ntBASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 AC114947.1-202ENST00000514136 344 ntBASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 KRT8P1-201ENST00000557533 1207 ntBASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 AC007326.1-201ENST00000604539 458 ntBASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CLIP2Q9UDT6 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 AC069218.1-201ENST00000435269 762 ntBASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 ALG1L13P-202ENST00000519320 584 ntBASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 CCT8L1P-201ENST00000465400 1674 ntBASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CLIP2Q9UDT6 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLIP2Q9UDT6 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CLIP2Q9UDT6 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLIP2Q9UDT6 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLIP2Q9UDT6 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms