Protein–RNA interactions for Protein: Q9UD57

NKX1-2, NK1 transcription factor-related protein 2, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-2Q9UD57 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.42□□□□□ -0.26
NKX1-2Q9UD57 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX1-2Q9UD57 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX1-2Q9UD57 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.42□□□□□ -0.26
NKX1-2Q9UD57 PUDPP3-201ENST00000445368 636 ntBASIC13.42□□□□□ -0.26
NKX1-2Q9UD57 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NKX1-2Q9UD57 AC093909.1-201ENST00000504731 1122 ntBASIC13.42□□□□□ -0.26
NKX1-2Q9UD57 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.42□□□□□ -0.26
NKX1-2Q9UD57 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.42□□□□□ -0.26
NKX1-2Q9UD57 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.42□□□□□ -0.26
NKX1-2Q9UD57 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.42□□□□□ -0.26
NKX1-2Q9UD57 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.42□□□□□ -0.26
NKX1-2Q9UD57 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX1-2Q9UD57 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
NKX1-2Q9UD57 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX1-2Q9UD57 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
NKX1-2Q9UD57 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX1-2Q9UD57 BORA-202ENST00000377815 1673 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
NKX1-2Q9UD57 BTNL8-202ENST00000340184 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX1-2Q9UD57 DYNC1I1-204ENST00000437599 2895 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NKX1-2Q9UD57 PAX8-205ENST00000429538 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX1-2Q9UD57 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX1-2Q9UD57 Z98885.3-201ENST00000624882 1757 ntBASIC13.42□□□□□ -0.26
NKX1-2Q9UD57 P4HA1-201ENST00000263556 2844 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX1-2Q9UD57 P4HA1-204ENST00000394890 2844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX1-2Q9UD57 CICP18-201ENST00000406017 2812 ntBASIC13.42□□□□□ -0.26
NKX1-2Q9UD57 SLC4A9-201ENST00000432095 3086 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NKX1-2Q9UD57 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC13.42□□□□□ -0.26
NKX1-2Q9UD57 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX1-2Q9UD57 SLC8B1-213ENST00000552014 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX1-2Q9UD57 SUCLG2-201ENST00000307227 2352 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX1-2Q9UD57 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NKX1-2Q9UD57 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.42□□□□□ -0.26
NKX1-2Q9UD57 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.42□□□□□ -0.26
NKX1-2Q9UD57 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC13.42□□□□□ -0.26
NKX1-2Q9UD57 TP53I11-203ENST00000395648 3381 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 CACNA2D2-206ENST00000479441 3453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 RGL1-202ENST00000360851 4724 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 SMIM21-202ENST00000579022 1834 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 RANGAP1-201ENST00000356244 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 AC005237.2-201ENST00000434368 219 ntBASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 CDCA2-202ENST00000380665 3565 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 HIF3A-204ENST00000300862 2551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 CCDC112-201ENST00000379611 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 ZFHX2-AS1-201ENST00000553985 2322 ntTSL 2 BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 GYG2-204ENST00000381163 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 SYBU-203ENST00000408889 2776 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 POFUT2-213ENST00000612472 2959 ntTSL 5 BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 RAB6A-202ENST00000336083 3085 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NKX1-2Q9UD57 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX1-2Q9UD57 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC13.4□□□□□ -0.26
NKX1-2Q9UD57 MAK16-201ENST00000360128 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX1-2Q9UD57 NECTIN2-201ENST00000252483 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX1-2Q9UD57 ATP2A3-203ENST00000359983 3290 ntTSL 5 BASIC13.4□□□□□ -0.26
NKX1-2Q9UD57 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms