Protein–RNA interactions for Protein: Q8N2R8

FAM43A, Protein FAM43A, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM43AQ8N2R8 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FAM43AQ8N2R8 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
FAM43AQ8N2R8 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
FAM43AQ8N2R8 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FAM43AQ8N2R8 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FAM43AQ8N2R8 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
FAM43AQ8N2R8 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FAM43AQ8N2R8 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FAM43AQ8N2R8 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC17.5■□□□□ 0.39
FAM43AQ8N2R8 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC17.5■□□□□ 0.39
FAM43AQ8N2R8 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC17.5■□□□□ 0.39
FAM43AQ8N2R8 AC073150.1-201ENST00000450406 1084 ntBASIC17.5■□□□□ 0.39
FAM43AQ8N2R8 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FAM43AQ8N2R8 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC17.5■□□□□ 0.39
FAM43AQ8N2R8 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC17.5■□□□□ 0.39
FAM43AQ8N2R8 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC17.5■□□□□ 0.39
FAM43AQ8N2R8 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC17.5■□□□□ 0.39
FAM43AQ8N2R8 AC135983.4-201ENST00000564116 1262 ntBASIC17.5■□□□□ 0.39
FAM43AQ8N2R8 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC17.5■□□□□ 0.39
FAM43AQ8N2R8 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FAM43AQ8N2R8 AL136295.7-201ENST00000619226 1200 ntBASIC17.5■□□□□ 0.39
FAM43AQ8N2R8 AL645728.2-202ENST00000641679 227 ntBASIC17.5■□□□□ 0.39
FAM43AQ8N2R8 AL805961.1-201ENST00000642026 753 ntBASIC17.5■□□□□ 0.39
FAM43AQ8N2R8 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
FAM43AQ8N2R8 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
FAM43AQ8N2R8 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FAM43AQ8N2R8 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FAM43AQ8N2R8 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
FAM43AQ8N2R8 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
FAM43AQ8N2R8 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FAM43AQ8N2R8 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
FAM43AQ8N2R8 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
FAM43AQ8N2R8 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FAM43AQ8N2R8 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
FAM43AQ8N2R8 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
FAM43AQ8N2R8 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FAM43AQ8N2R8 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
FAM43AQ8N2R8 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FAM43AQ8N2R8 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
FAM43AQ8N2R8 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FAM43AQ8N2R8 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FAM43AQ8N2R8 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FAM43AQ8N2R8 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC17.49■□□□□ 0.39
FAM43AQ8N2R8 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FAM43AQ8N2R8 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
FAM43AQ8N2R8 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FAM43AQ8N2R8 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
FAM43AQ8N2R8 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC17.49■□□□□ 0.39
FAM43AQ8N2R8 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
FAM43AQ8N2R8 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FAM43AQ8N2R8 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FAM43AQ8N2R8 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC17.49■□□□□ 0.39
FAM43AQ8N2R8 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC17.49■□□□□ 0.39
FAM43AQ8N2R8 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
FAM43AQ8N2R8 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FAM43AQ8N2R8 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
FAM43AQ8N2R8 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC17.49■□□□□ 0.39
FAM43AQ8N2R8 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
FAM43AQ8N2R8 RPL13AP19-201ENST00000434320 584 ntBASIC17.49■□□□□ 0.39
FAM43AQ8N2R8 AC026434.2-201ENST00000506094 1078 ntBASIC17.49■□□□□ 0.39
FAM43AQ8N2R8 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FAM43AQ8N2R8 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.49■□□□□ 0.39
FAM43AQ8N2R8 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC17.49■□□□□ 0.39
FAM43AQ8N2R8 MIR4754-201ENST00000582477 89 ntBASIC17.49■□□□□ 0.39
FAM43AQ8N2R8 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FAM43AQ8N2R8 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC17.49■□□□□ 0.39
FAM43AQ8N2R8 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FAM43AQ8N2R8 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
FAM43AQ8N2R8 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
FAM43AQ8N2R8 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FAM43AQ8N2R8 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
FAM43AQ8N2R8 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FAM43AQ8N2R8 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FAM43AQ8N2R8 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
FAM43AQ8N2R8 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.49■□□□□ 0.39
FAM43AQ8N2R8 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC17.49■□□□□ 0.39
FAM43AQ8N2R8 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FAM43AQ8N2R8 E2F3P2-201ENST00000447755 1422 ntBASIC17.48■□□□□ 0.39
FAM43AQ8N2R8 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
FAM43AQ8N2R8 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC17.48■□□□□ 0.39
FAM43AQ8N2R8 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
FAM43AQ8N2R8 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FAM43AQ8N2R8 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.48■□□□□ 0.39
FAM43AQ8N2R8 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.48■□□□□ 0.39
FAM43AQ8N2R8 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FAM43AQ8N2R8 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FAM43AQ8N2R8 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
FAM43AQ8N2R8 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FAM43AQ8N2R8 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
FAM43AQ8N2R8 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.48■□□□□ 0.39
FAM43AQ8N2R8 RN7SKP175-201ENST00000408472 289 ntBASIC17.48■□□□□ 0.39
FAM43AQ8N2R8 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.48■□□□□ 0.39
FAM43AQ8N2R8 RPSAP31-201ENST00000416648 895 ntBASIC17.48■□□□□ 0.39
FAM43AQ8N2R8 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.48■□□□□ 0.39
FAM43AQ8N2R8 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC17.48■□□□□ 0.39
FAM43AQ8N2R8 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC17.48■□□□□ 0.39
FAM43AQ8N2R8 AC090857.1-201ENST00000527400 390 ntBASIC17.48■□□□□ 0.39
FAM43AQ8N2R8 NEU3-205ENST00000531619 582 ntTSL 5 BASIC17.48■□□□□ 0.39
FAM43AQ8N2R8 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
FAM43AQ8N2R8 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms