Protein–RNA interactions for Protein: Q6RI45

BRWD3, Bromodomain and WD repeat-containing protein 3, humanhuman

Predictions only

Length 1,802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD3Q6RI45 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BRWD3Q6RI45 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BRWD3Q6RI45 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BRWD3Q6RI45 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.38■□□□□ 0.37
BRWD3Q6RI45 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRWD3Q6RI45 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BRWD3Q6RI45 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BRWD3Q6RI45 TMEM107-201ENST00000316425 756 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRWD3Q6RI45 TRGV4-201ENST00000390345 688 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
BRWD3Q6RI45 AL450322.2-201ENST00000421629 759 ntTSL 3 BASIC17.38■□□□□ 0.37
BRWD3Q6RI45 TRGV2-201ENST00000426402 544 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
BRWD3Q6RI45 AC234582.2-201ENST00000455788 568 ntTSL 3 BASIC17.38■□□□□ 0.37
BRWD3Q6RI45 MT1G-204ENST00000569500 305 ntTSL 3 BASIC17.38■□□□□ 0.37
BRWD3Q6RI45 AC010615.2-201ENST00000596705 566 ntTSL 4 BASIC17.38■□□□□ 0.37
BRWD3Q6RI45 FXYD3-207ENST00000604255 780 ntTSL 5 BASIC17.38■□□□□ 0.37
BRWD3Q6RI45 AC022296.3-201ENST00000608823 403 ntBASIC17.38■□□□□ 0.37
BRWD3Q6RI45 FRG2EP-201ENST00000634243 835 ntBASIC17.38■□□□□ 0.37
BRWD3Q6RI45 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
BRWD3Q6RI45 ACKR1-202ENST00000368122 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRWD3Q6RI45 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BRWD3Q6RI45 BSDC1-209ENST00000526031 1361 ntTSL 2 BASIC17.38■□□□□ 0.37
BRWD3Q6RI45 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.38■□□□□ 0.37
BRWD3Q6RI45 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRWD3Q6RI45 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRWD3Q6RI45 DDX6-202ENST00000526070 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRWD3Q6RI45 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
BRWD3Q6RI45 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRWD3Q6RI45 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRWD3Q6RI45 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRWD3Q6RI45 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRWD3Q6RI45 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.38■□□□□ 0.37
BRWD3Q6RI45 MTHFR-210ENST00000641407 2387 ntBASIC17.38■□□□□ 0.37
BRWD3Q6RI45 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
BRWD3Q6RI45 SRL-202ENST00000537996 1814 ntTSL 2 BASIC17.38■□□□□ 0.37
BRWD3Q6RI45 FATE1-201ENST00000370350 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BRWD3Q6RI45 AL583824.1-203ENST00000457948 761 ntTSL 2 BASIC17.37■□□□□ 0.37
BRWD3Q6RI45 AC108082.1-201ENST00000510857 331 ntBASIC17.37■□□□□ 0.37
BRWD3Q6RI45 AC245884.8-201ENST00000599382 880 ntBASIC17.37■□□□□ 0.37
BRWD3Q6RI45 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC17.37■□□□□ 0.37
BRWD3Q6RI45 SERPING1-213ENST00000619430 634 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BRWD3Q6RI45 UBR1-212ENST00000627960 189 ntTSL 5 BASIC17.37■□□□□ 0.37
BRWD3Q6RI45 PUDPP2-202ENST00000628080 737 ntTSL 5 BASIC17.37■□□□□ 0.37
BRWD3Q6RI45 AL118508.1-201ENST00000613502 2345 ntBASIC17.37■□□□□ 0.37
BRWD3Q6RI45 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
BRWD3Q6RI45 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BRWD3Q6RI45 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.37■□□□□ 0.37
BRWD3Q6RI45 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BRWD3Q6RI45 AC073488.1-201ENST00000416620 1600 ntBASIC17.37■□□□□ 0.37
BRWD3Q6RI45 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
BRWD3Q6RI45 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
BRWD3Q6RI45 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
BRWD3Q6RI45 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BRWD3Q6RI45 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BRWD3Q6RI45 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BRWD3Q6RI45 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.37■□□□□ 0.37
BRWD3Q6RI45 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BRWD3Q6RI45 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BRWD3Q6RI45 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.37■□□□□ 0.37
BRWD3Q6RI45 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BRWD3Q6RI45 FKBP4P7-201ENST00000433874 1363 ntBASIC17.37■□□□□ 0.37
BRWD3Q6RI45 TIMP1-201ENST00000218388 892 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BRWD3Q6RI45 TIMP1-202ENST00000377017 626 ntTSL 2 BASIC17.37■□□□□ 0.37
BRWD3Q6RI45 AC104623.1-201ENST00000446357 546 ntTSL 4 BASIC17.37■□□□□ 0.37
BRWD3Q6RI45 DMKN-244ENST00000480502 820 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
BRWD3Q6RI45 AC007992.1-201ENST00000513953 953 ntBASIC17.37■□□□□ 0.37
BRWD3Q6RI45 AC092435.2-201ENST00000515530 524 ntTSL 4 BASIC17.37■□□□□ 0.37
BRWD3Q6RI45 AC008915.2-201ENST00000570080 730 ntTSL 5 BASIC17.37■□□□□ 0.37
BRWD3Q6RI45 AC005154.1-204ENST00000580902 926 ntTSL 4 BASIC17.37■□□□□ 0.37
BRWD3Q6RI45 AC021594.2-201ENST00000592499 527 ntTSL 3 BASIC17.37■□□□□ 0.37
BRWD3Q6RI45 AC004832.1-204ENST00000610737 1018 ntTSL 5 BASIC17.37■□□□□ 0.37
BRWD3Q6RI45 RN7SL341P-201ENST00000613745 298 ntBASIC17.37■□□□□ 0.37
BRWD3Q6RI45 C17orf98-201ENST00000614158 632 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
BRWD3Q6RI45 AC097634.2-201ENST00000615819 604 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BRWD3Q6RI45 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BRWD3Q6RI45 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
BRWD3Q6RI45 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
BRWD3Q6RI45 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BRWD3Q6RI45 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
BRWD3Q6RI45 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.37■□□□□ 0.37
BRWD3Q6RI45 CACNA1G-AS1-202ENST00000505793 1433 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
BRWD3Q6RI45 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
BRWD3Q6RI45 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
BRWD3Q6RI45 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.36■□□□□ 0.37
BRWD3Q6RI45 SGCE-201ENST00000265735 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BRWD3Q6RI45 KIR2DL4-204ENST00000359085 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
BRWD3Q6RI45 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BRWD3Q6RI45 MESTP4-201ENST00000412333 1204 ntBASIC17.36■□□□□ 0.37
BRWD3Q6RI45 AC007312.1-201ENST00000427493 258 ntBASIC17.36■□□□□ 0.37
BRWD3Q6RI45 PRRX2-AS1-201ENST00000440413 429 ntTSL 2 BASIC17.36■□□□□ 0.37
BRWD3Q6RI45 KRT16P4-202ENST00000580052 362 ntTSL 3 BASIC17.36■□□□□ 0.37
BRWD3Q6RI45 AP001120.3-201ENST00000585729 489 ntBASIC17.36■□□□□ 0.37
BRWD3Q6RI45 AC104423.1-201ENST00000591742 728 ntTSL 3 BASIC17.36■□□□□ 0.37
BRWD3Q6RI45 AL669831.3-208ENST00000634337 891 ntTSL 5 BASIC17.36■□□□□ 0.37
BRWD3Q6RI45 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BRWD3Q6RI45 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
BRWD3Q6RI45 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
BRWD3Q6RI45 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BRWD3Q6RI45 NDEL1-203ENST00000402554 1858 ntTSL 5 BASIC17.36■□□□□ 0.37
BRWD3Q6RI45 RBM4-202ENST00000396053 1337 ntTSL 2 BASIC17.36■□□□□ 0.37
BRWD3Q6RI45 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms