Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.31■□□□□ 0.2
SHROOM1Q2M3G4 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 RCC2P1-201ENST00000452257 1476 ntBASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 AC152010.1-201ENST00000415779 2006 ntBASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 RHOC-205ENST00000369636 786 ntTSL 2 BASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 OR2W2P-201ENST00000406313 909 ntBASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 HNRNPA1P2-207ENST00000432375 960 ntBASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 KRT18P62-201ENST00000446618 1287 ntBASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 AC092903.1-201ENST00000466506 262 ntBASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 PFN2-212ENST00000490975 858 ntTSL 4 BASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 AC008026.2-201ENST00000495438 348 ntBASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 RN7SL596P-201ENST00000582123 288 ntBASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 RARS-210ENST00000626454 177 ntTSL 5 BASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 AC089987.1-201ENST00000551654 2209 ntBASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC16.3■□□□□ 0.2
SHROOM1Q2M3G4 AC090643.2-201ENST00000623442 2029 ntBASIC16.29■□□□□ 0.2
SHROOM1Q2M3G4 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHROOM1Q2M3G4 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHROOM1Q2M3G4 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC16.29■□□□□ 0.2
SHROOM1Q2M3G4 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC16.29■□□□□ 0.2
SHROOM1Q2M3G4 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SHROOM1Q2M3G4 Z98885.3-201ENST00000624882 1757 ntBASIC16.29■□□□□ 0.2
SHROOM1Q2M3G4 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHROOM1Q2M3G4 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHROOM1Q2M3G4 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHROOM1Q2M3G4 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SHROOM1Q2M3G4 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC16.29■□□□□ 0.2
SHROOM1Q2M3G4 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC16.29■□□□□ 0.2
SHROOM1Q2M3G4 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC16.29■□□□□ 0.2
SHROOM1Q2M3G4 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC16.29■□□□□ 0.2
SHROOM1Q2M3G4 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC16.29■□□□□ 0.2
SHROOM1Q2M3G4 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHROOM1Q2M3G4 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC16.29■□□□□ 0.2
SHROOM1Q2M3G4 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC16.29■□□□□ 0.2
SHROOM1Q2M3G4 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC16.29■□□□□ 0.2
SHROOM1Q2M3G4 AC093462.1-201ENST00000621167 1683 ntBASIC16.29■□□□□ 0.2
SHROOM1Q2M3G4 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC16.29■□□□□ 0.2
SHROOM1Q2M3G4 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHROOM1Q2M3G4 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC16.29■□□□□ 0.2
SHROOM1Q2M3G4 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC16.29■□□□□ 0.2
SHROOM1Q2M3G4 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SHROOM1Q2M3G4 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC16.29■□□□□ 0.2
SHROOM1Q2M3G4 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHROOM1Q2M3G4 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC16.29■□□□□ 0.2
SHROOM1Q2M3G4 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHROOM1Q2M3G4 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SHROOM1Q2M3G4 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 AC234644.1-201ENST00000406065 370 ntBASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 ALG1L3P-201ENST00000503331 765 ntBASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 CD44-224ENST00000526669 870 ntTSL 5 BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 MT3-202ENST00000561640 514 ntTSL 3 BASIC16.28■□□□□ 0.2
SHROOM1Q2M3G4 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms