Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RSPO4Q2I0M5 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 AC106881.1-201ENST00000605849 3329 ntBASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 VKORC1-203ENST00000354895 901 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 CRCT1-201ENST00000368790 700 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 PSME2P2-201ENST00000453033 700 ntBASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 OR52V1P-201ENST00000515557 898 ntBASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 AC010202.1-201ENST00000551181 405 ntBASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 ABCD1P3-201ENST00000562927 605 ntBASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 AC097474.1-201ENST00000506481 1371 ntBASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RSPO4Q2I0M5 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 AC079325.1-201ENST00000430386 857 ntBASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 AC092810.2-201ENST00000431570 362 ntBASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 UGT1A12P-201ENST00000447084 853 ntBASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 AC098799.1-201ENST00000504752 800 ntBASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 AL592146.2-201ENST00000565388 444 ntTSL 5 BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 PCTP-206ENST00000573500 919 ntTSL 3 BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RSPO4Q2I0M5 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms