Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.87□□□□□ -0.03
IRX4P78413 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC14.87□□□□□ -0.03
IRX4P78413 MIR4683-201ENST00000579659 81 ntBASIC14.87□□□□□ -0.03
IRX4P78413 WDR7-208ENST00000589935 544 ntTSL 4 BASIC14.87□□□□□ -0.03
IRX4P78413 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
IRX4P78413 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.87□□□□□ -0.03
IRX4P78413 COX6A1P2-201ENST00000620597 330 ntBASIC14.87□□□□□ -0.03
IRX4P78413 AL162426.1-201ENST00000624141 743 ntBASIC14.87□□□□□ -0.03
IRX4P78413 AC006453.1-201ENST00000636037 1257 ntBASIC14.87□□□□□ -0.03
IRX4P78413 AL603764.1-201ENST00000636452 321 ntBASIC14.87□□□□□ -0.03
IRX4P78413 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
IRX4P78413 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
IRX4P78413 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.87□□□□□ -0.03
IRX4P78413 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
IRX4P78413 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
IRX4P78413 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.87□□□□□ -0.03
IRX4P78413 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
IRX4P78413 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
IRX4P78413 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
IRX4P78413 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC14.87□□□□□ -0.03
IRX4P78413 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.87□□□□□ -0.03
IRX4P78413 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.87□□□□□ -0.03
IRX4P78413 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
IRX4P78413 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
IRX4P78413 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
IRX4P78413 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
IRX4P78413 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
IRX4P78413 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC14.86□□□□□ -0.03
IRX4P78413 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
IRX4P78413 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
IRX4P78413 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
IRX4P78413 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
IRX4P78413 AC130686.1-201ENST00000622936 2466 ntBASIC14.86□□□□□ -0.03
IRX4P78413 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
IRX4P78413 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
IRX4P78413 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
IRX4P78413 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.86□□□□□ -0.03
IRX4P78413 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.86□□□□□ -0.03
IRX4P78413 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.86□□□□□ -0.03
IRX4P78413 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.86□□□□□ -0.03
IRX4P78413 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
IRX4P78413 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
IRX4P78413 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC14.86□□□□□ -0.03
IRX4P78413 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC14.86□□□□□ -0.03
IRX4P78413 MESTP3-201ENST00000503460 968 ntBASIC14.86□□□□□ -0.03
IRX4P78413 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
IRX4P78413 AC116345.2-201ENST00000512837 523 ntBASIC14.86□□□□□ -0.03
IRX4P78413 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
IRX4P78413 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
IRX4P78413 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.86□□□□□ -0.03
IRX4P78413 AC100827.2-201ENST00000563214 1194 ntBASIC14.86□□□□□ -0.03
IRX4P78413 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.86□□□□□ -0.03
IRX4P78413 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
IRX4P78413 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
IRX4P78413 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.86□□□□□ -0.03
IRX4P78413 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
IRX4P78413 AL136301.1-201ENST00000615830 422 ntBASIC14.86□□□□□ -0.03
IRX4P78413 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.86□□□□□ -0.03
IRX4P78413 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
IRX4P78413 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
IRX4P78413 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.86□□□□□ -0.03
IRX4P78413 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.86□□□□□ -0.03
IRX4P78413 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
IRX4P78413 FKBP4P6-201ENST00000457486 1332 ntBASIC14.86□□□□□ -0.03
IRX4P78413 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
IRX4P78413 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
IRX4P78413 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
IRX4P78413 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
IRX4P78413 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
IRX4P78413 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
IRX4P78413 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
IRX4P78413 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
IRX4P78413 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
IRX4P78413 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
IRX4P78413 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
IRX4P78413 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
IRX4P78413 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
IRX4P78413 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
IRX4P78413 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
IRX4P78413 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
IRX4P78413 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
IRX4P78413 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
IRX4P78413 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
IRX4P78413 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
IRX4P78413 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
IRX4P78413 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
IRX4P78413 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
IRX4P78413 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC14.85□□□□□ -0.03
IRX4P78413 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
IRX4P78413 RN7SKP214-201ENST00000364208 315 ntBASIC14.85□□□□□ -0.03
IRX4P78413 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
IRX4P78413 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.85□□□□□ -0.03
IRX4P78413 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
IRX4P78413 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC14.85□□□□□ -0.03
IRX4P78413 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.85□□□□□ -0.03
IRX4P78413 MIR4783-201ENST00000580343 82 ntBASIC14.85□□□□□ -0.03
IRX4P78413 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.85□□□□□ -0.03
IRX4P78413 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.85□□□□□ -0.03
IRX4P78413 AL358472.3-201ENST00000608147 415 ntBASIC14.85□□□□□ -0.03
IRX4P78413 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms