Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SNRPFP62306 AL583805.1-201ENST00000391389 531 ntBASIC15.29■□□□□ 0.04
SNRPFP62306 NME4-203ENST00000397722 1232 ntTSL 2 BASIC15.29■□□□□ 0.04
SNRPFP62306 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SNRPFP62306 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNRPFP62306 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC15.29■□□□□ 0.04
SNRPFP62306 AL807761.2-201ENST00000422849 729 ntBASIC15.29■□□□□ 0.04
SNRPFP62306 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC15.29■□□□□ 0.04
SNRPFP62306 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC15.29■□□□□ 0.04
SNRPFP62306 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC15.29■□□□□ 0.04
SNRPFP62306 AC018638.5-201ENST00000450885 754 ntBASIC15.29■□□□□ 0.04
SNRPFP62306 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC15.29■□□□□ 0.04
SNRPFP62306 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SNRPFP62306 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC15.29■□□□□ 0.04
SNRPFP62306 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC15.29■□□□□ 0.04
SNRPFP62306 MIR3940-201ENST00000579148 102 ntBASIC15.29■□□□□ 0.04
SNRPFP62306 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
SNRPFP62306 AC007326.1-201ENST00000604539 458 ntBASIC15.29■□□□□ 0.04
SNRPFP62306 GARS-210ENST00000627489 324 ntTSL 4 BASIC15.29■□□□□ 0.04
SNRPFP62306 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SNRPFP62306 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNRPFP62306 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNRPFP62306 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNRPFP62306 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC15.29■□□□□ 0.04
SNRPFP62306 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNRPFP62306 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.29■□□□□ 0.04
SNRPFP62306 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNRPFP62306 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SNRPFP62306 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC15.29■□□□□ 0.04
SNRPFP62306 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNRPFP62306 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNRPFP62306 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNRPFP62306 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC15.28■□□□□ 0.04
SNRPFP62306 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC15.28■□□□□ 0.04
SNRPFP62306 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SNRPFP62306 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNRPFP62306 NRADDP-202ENST00000641269 1585 ntBASIC15.28■□□□□ 0.04
SNRPFP62306 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SNRPFP62306 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNRPFP62306 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNRPFP62306 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC15.28■□□□□ 0.04
SNRPFP62306 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNRPFP62306 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SNRPFP62306 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNRPFP62306 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC15.28■□□□□ 0.04
SNRPFP62306 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SNRPFP62306 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
SNRPFP62306 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SNRPFP62306 OR2K2-202ENST00000374428 1038 ntBASIC15.28■□□□□ 0.04
SNRPFP62306 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
SNRPFP62306 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNRPFP62306 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNRPFP62306 AC007274.2-201ENST00000421675 662 ntBASIC15.28■□□□□ 0.04
SNRPFP62306 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC15.28■□□□□ 0.04
SNRPFP62306 AC245884.6-201ENST00000515672 1067 ntBASIC15.28■□□□□ 0.04
SNRPFP62306 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SNRPFP62306 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.28■□□□□ 0.04
SNRPFP62306 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.28■□□□□ 0.04
SNRPFP62306 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC15.28■□□□□ 0.04
SNRPFP62306 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC15.28■□□□□ 0.04
SNRPFP62306 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC15.28■□□□□ 0.04
SNRPFP62306 SIGLEC22P-201ENST00000599104 714 ntBASIC15.28■□□□□ 0.04
SNRPFP62306 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SNRPFP62306 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.28■□□□□ 0.04
SNRPFP62306 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC15.28■□□□□ 0.04
SNRPFP62306 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC15.28■□□□□ 0.04
SNRPFP62306 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SNRPFP62306 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
SNRPFP62306 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNRPFP62306 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNRPFP62306 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNRPFP62306 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNRPFP62306 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.28■□□□□ 0.04
SNRPFP62306 Z98885.3-201ENST00000624882 1757 ntBASIC15.28■□□□□ 0.04
SNRPFP62306 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SNRPFP62306 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNRPFP62306 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
SNRPFP62306 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNRPFP62306 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNRPFP62306 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SNRPFP62306 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.28■□□□□ 0.04
SNRPFP62306 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNRPFP62306 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SNRPFP62306 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
SNRPFP62306 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNRPFP62306 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNRPFP62306 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SNRPFP62306 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNRPFP62306 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.27■□□□□ 0.04
SNRPFP62306 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNRPFP62306 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SNRPFP62306 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNRPFP62306 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNRPFP62306 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNRPFP62306 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNRPFP62306 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNRPFP62306 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNRPFP62306 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC15.27■□□□□ 0.04
SNRPFP62306 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNRPFP62306 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms