Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC13.55□□□□□ -0.24
CLDN6P56747 AP005264.5-201ENST00000590066 467 ntBASIC13.55□□□□□ -0.24
CLDN6P56747 AL359091.4-201ENST00000610052 409 ntBASIC13.55□□□□□ -0.24
CLDN6P56747 TP53-221ENST00000615910 1149 ntTSL 5 BASIC13.55□□□□□ -0.24
CLDN6P56747 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC13.55□□□□□ -0.24
CLDN6P56747 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN6P56747 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN6P56747 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.55□□□□□ -0.24
CLDN6P56747 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.55□□□□□ -0.24
CLDN6P56747 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.55□□□□□ -0.24
CLDN6P56747 PDXDC2P-206ENST00000534700 1315 ntBASIC13.55□□□□□ -0.24
CLDN6P56747 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN6P56747 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN6P56747 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN6P56747 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN6P56747 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN6P56747 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN6P56747 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
CLDN6P56747 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN6P56747 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC13.55□□□□□ -0.24
CLDN6P56747 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN6P56747 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN6P56747 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN6P56747 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN6P56747 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN6P56747 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN6P56747 AL390755.1-201ENST00000623716 2027 ntBASIC13.54□□□□□ -0.24
CLDN6P56747 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN6P56747 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CLDN6P56747 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN6P56747 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.54□□□□□ -0.24
CLDN6P56747 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CLDN6P56747 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.54□□□□□ -0.24
CLDN6P56747 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN6P56747 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN6P56747 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.54□□□□□ -0.24
CLDN6P56747 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN6P56747 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN6P56747 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.54□□□□□ -0.24
CLDN6P56747 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.54□□□□□ -0.24
CLDN6P56747 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN6P56747 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN6P56747 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC13.54□□□□□ -0.24
CLDN6P56747 RPL3P2-204ENST00000413027 1203 ntBASIC13.54□□□□□ -0.24
CLDN6P56747 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC13.54□□□□□ -0.24
CLDN6P56747 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC13.54□□□□□ -0.24
CLDN6P56747 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CLDN6P56747 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CLDN6P56747 AL161932.2-201ENST00000435436 679 ntBASIC13.54□□□□□ -0.24
CLDN6P56747 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC13.54□□□□□ -0.24
CLDN6P56747 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC13.54□□□□□ -0.24
CLDN6P56747 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN6P56747 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CLDN6P56747 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN6P56747 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC13.54□□□□□ -0.24
CLDN6P56747 AC023968.2-201ENST00000560593 1049 ntBASIC13.54□□□□□ -0.24
CLDN6P56747 SNORD3B-1-201ENST00000577988 758 ntBASIC13.54□□□□□ -0.24
CLDN6P56747 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC13.54□□□□□ -0.24
CLDN6P56747 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN6P56747 RARS-210ENST00000626454 177 ntTSL 5 BASIC13.54□□□□□ -0.24
CLDN6P56747 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN6P56747 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN6P56747 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN6P56747 AC215219.1-201ENST00000400706 1817 ntBASIC13.54□□□□□ -0.24
CLDN6P56747 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN6P56747 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.54□□□□□ -0.24
CLDN6P56747 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN6P56747 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN6P56747 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.54□□□□□ -0.24
CLDN6P56747 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.54□□□□□ -0.24
CLDN6P56747 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN6P56747 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN6P56747 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CLDN6P56747 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN6P56747 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CLDN6P56747 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN6P56747 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC13.54□□□□□ -0.24
CLDN6P56747 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CLDN6P56747 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.54□□□□□ -0.24
CLDN6P56747 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CLDN6P56747 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN6P56747 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
CLDN6P56747 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN6P56747 AC023908.3-201ENST00000564211 3047 ntBASIC13.53□□□□□ -0.24
CLDN6P56747 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN6P56747 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN6P56747 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN6P56747 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN6P56747 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC13.53□□□□□ -0.24
CLDN6P56747 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN6P56747 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN6P56747 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN6P56747 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.53□□□□□ -0.24
CLDN6P56747 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN6P56747 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN6P56747 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.53□□□□□ -0.24
CLDN6P56747 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CLDN6P56747 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN6P56747 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLDN6P56747 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms