Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
CDKN2DP55273 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDKN2DP55273 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.96□□□□□ -0.17
CDKN2DP55273 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDKN2DP55273 AC108024.1-201ENST00000626286 1721 ntBASIC13.96□□□□□ -0.17
CDKN2DP55273 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDKN2DP55273 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CDKN2DP55273 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDKN2DP55273 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC13.96□□□□□ -0.17
CDKN2DP55273 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC13.96□□□□□ -0.17
CDKN2DP55273 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDKN2DP55273 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
CDKN2DP55273 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDKN2DP55273 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CDKN2DP55273 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDKN2DP55273 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDKN2DP55273 RNA5SP359-201ENST00000364838 113 ntBASIC13.96□□□□□ -0.17
CDKN2DP55273 GK-202ENST00000378941 458 ntTSL 3 BASIC13.96□□□□□ -0.17
CDKN2DP55273 OR8T1P-201ENST00000421347 918 ntBASIC13.96□□□□□ -0.17
CDKN2DP55273 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.96□□□□□ -0.17
CDKN2DP55273 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.96□□□□□ -0.17
CDKN2DP55273 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.96□□□□□ -0.17
CDKN2DP55273 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDKN2DP55273 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDKN2DP55273 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
CDKN2DP55273 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.96□□□□□ -0.17
CDKN2DP55273 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC13.96□□□□□ -0.17
CDKN2DP55273 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDKN2DP55273 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDKN2DP55273 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.96□□□□□ -0.17
CDKN2DP55273 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC13.96□□□□□ -0.17
CDKN2DP55273 AL008638.5-201ENST00000623814 1298 ntBASIC13.96□□□□□ -0.17
CDKN2DP55273 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDKN2DP55273 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDKN2DP55273 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDKN2DP55273 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CDKN2DP55273 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDKN2DP55273 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDKN2DP55273 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDKN2DP55273 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDKN2DP55273 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CDKN2DP55273 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDKN2DP55273 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDKN2DP55273 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC13.96□□□□□ -0.18
CDKN2DP55273 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.96□□□□□ -0.18
CDKN2DP55273 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.95□□□□□ -0.18
CDKN2DP55273 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.95□□□□□ -0.18
CDKN2DP55273 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2DP55273 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CDKN2DP55273 PHB-210ENST00000511832 1509 ntTSL 2 BASIC13.95□□□□□ -0.18
CDKN2DP55273 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.95□□□□□ -0.18
CDKN2DP55273 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2DP55273 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.95□□□□□ -0.18
CDKN2DP55273 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC13.95□□□□□ -0.18
CDKN2DP55273 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2DP55273 AC019294.4-201ENST00000561777 2905 ntBASIC13.95□□□□□ -0.18
CDKN2DP55273 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
CDKN2DP55273 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2DP55273 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.95□□□□□ -0.18
CDKN2DP55273 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2DP55273 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CDKN2DP55273 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.95□□□□□ -0.18
CDKN2DP55273 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2DP55273 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2DP55273 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CDKN2DP55273 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2DP55273 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2DP55273 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2DP55273 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.95□□□□□ -0.18
CDKN2DP55273 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2DP55273 SNORA50C-201ENST00000408535 133 ntBASIC13.95□□□□□ -0.18
CDKN2DP55273 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.95□□□□□ -0.18
CDKN2DP55273 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.95□□□□□ -0.18
CDKN2DP55273 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.95□□□□□ -0.18
CDKN2DP55273 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.95□□□□□ -0.18
CDKN2DP55273 CHCHD2P2-201ENST00000503744 321 ntBASIC13.95□□□□□ -0.18
CDKN2DP55273 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.95□□□□□ -0.18
CDKN2DP55273 CCNC-217ENST00000523985 958 ntTSL 2 BASIC13.95□□□□□ -0.18
CDKN2DP55273 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC13.95□□□□□ -0.18
CDKN2DP55273 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
CDKN2DP55273 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CDKN2DP55273 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.95□□□□□ -0.18
CDKN2DP55273 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CDKN2DP55273 SNORA50.1-201ENST00000628590 135 ntBASIC13.95□□□□□ -0.18
CDKN2DP55273 AL033527.4-201ENST00000641026 673 ntBASIC13.95□□□□□ -0.18
CDKN2DP55273 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2DP55273 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC13.95□□□□□ -0.18
CDKN2DP55273 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2DP55273 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2DP55273 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2DP55273 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2DP55273 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CDKN2DP55273 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.95□□□□□ -0.18
CDKN2DP55273 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2DP55273 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2DP55273 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CDKN2DP55273 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CDKN2DP55273 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2DP55273 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDKN2DP55273 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms