Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 NEU3-205ENST00000531619 582 ntTSL 5 BASIC15.41■□□□□ 0.06
NCKAP1LP55160 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC15.41■□□□□ 0.06
NCKAP1LP55160 AC145285.5-201ENST00000562217 361 ntBASIC15.41■□□□□ 0.06
NCKAP1LP55160 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC15.41■□□□□ 0.06
NCKAP1LP55160 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC15.41■□□□□ 0.06
NCKAP1LP55160 AC138894.2-201ENST00000602838 371 ntBASIC15.41■□□□□ 0.06
NCKAP1LP55160 AC005632.3-201ENST00000605544 308 ntBASIC15.41■□□□□ 0.06
NCKAP1LP55160 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NCKAP1LP55160 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC15.41■□□□□ 0.06
NCKAP1LP55160 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NCKAP1LP55160 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NCKAP1LP55160 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NCKAP1LP55160 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NCKAP1LP55160 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NCKAP1LP55160 AC005840.4-201ENST00000541242 2494 ntBASIC15.41■□□□□ 0.06
NCKAP1LP55160 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NCKAP1LP55160 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NCKAP1LP55160 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC15.41■□□□□ 0.06
NCKAP1LP55160 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NCKAP1LP55160 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NCKAP1LP55160 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NCKAP1LP55160 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NCKAP1LP55160 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC15.41■□□□□ 0.06
NCKAP1LP55160 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NCKAP1LP55160 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
NCKAP1LP55160 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
NCKAP1LP55160 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NCKAP1LP55160 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.4■□□□□ 0.06
NCKAP1LP55160 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.4■□□□□ 0.06
NCKAP1LP55160 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NCKAP1LP55160 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC15.4■□□□□ 0.06
NCKAP1LP55160 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NCKAP1LP55160 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
NCKAP1LP55160 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NCKAP1LP55160 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NCKAP1LP55160 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NCKAP1LP55160 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NCKAP1LP55160 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NCKAP1LP55160 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NCKAP1LP55160 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NCKAP1LP55160 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC15.4■□□□□ 0.06
NCKAP1LP55160 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NCKAP1LP55160 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NCKAP1LP55160 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NCKAP1LP55160 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NCKAP1LP55160 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NCKAP1LP55160 NME4-203ENST00000397722 1232 ntTSL 2 BASIC15.4■□□□□ 0.06
NCKAP1LP55160 SNORA50C-201ENST00000408535 133 ntBASIC15.4■□□□□ 0.06
NCKAP1LP55160 AC018638.5-201ENST00000450885 754 ntBASIC15.4■□□□□ 0.06
NCKAP1LP55160 SCARNA12-201ENST00000459155 270 ntBASIC15.4■□□□□ 0.06
NCKAP1LP55160 RN7SL81P-201ENST00000493781 261 ntBASIC15.4■□□□□ 0.06
NCKAP1LP55160 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NCKAP1LP55160 MRPL22P1-201ENST00000505398 616 ntBASIC15.4■□□□□ 0.06
NCKAP1LP55160 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
NCKAP1LP55160 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
NCKAP1LP55160 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NCKAP1LP55160 POLD4-208ENST00000532830 904 ntTSL 3 BASIC15.4■□□□□ 0.06
NCKAP1LP55160 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
NCKAP1LP55160 PRKXP1-201ENST00000561423 1122 ntBASIC15.4■□□□□ 0.06
NCKAP1LP55160 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NCKAP1LP55160 AC132825.4-202ENST00000578792 434 ntBASIC15.4■□□□□ 0.06
NCKAP1LP55160 MIR4265-201ENST00000582152 99 ntBASIC15.4■□□□□ 0.06
NCKAP1LP55160 HPX-213ENST00000615166 826 ntTSL 5 BASIC15.4■□□□□ 0.06
NCKAP1LP55160 AL161773.1-201ENST00000624845 863 ntBASIC15.4■□□□□ 0.06
NCKAP1LP55160 SNORA50.1-201ENST00000628590 135 ntBASIC15.4■□□□□ 0.06
NCKAP1LP55160 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.4■□□□□ 0.06
NCKAP1LP55160 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
NCKAP1LP55160 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC15.4■□□□□ 0.06
NCKAP1LP55160 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NCKAP1LP55160 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NCKAP1LP55160 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NCKAP1LP55160 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC15.4■□□□□ 0.06
NCKAP1LP55160 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
NCKAP1LP55160 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NCKAP1LP55160 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NCKAP1LP55160 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NCKAP1LP55160 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NCKAP1LP55160 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC15.4■□□□□ 0.06
NCKAP1LP55160 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.4■□□□□ 0.06
NCKAP1LP55160 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC15.4■□□□□ 0.06
NCKAP1LP55160 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
NCKAP1LP55160 AC025183.3-201ENST00000623526 1482 ntBASIC15.4■□□□□ 0.06
NCKAP1LP55160 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NCKAP1LP55160 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NCKAP1LP55160 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NCKAP1LP55160 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC15.39■□□□□ 0.05
NCKAP1LP55160 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC15.39■□□□□ 0.05
NCKAP1LP55160 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
NCKAP1LP55160 FAM90A12P-201ENST00000519497 2375 ntBASIC15.39■□□□□ 0.05
NCKAP1LP55160 FAM90A24P-201ENST00000520792 2369 ntBASIC15.39■□□□□ 0.05
NCKAP1LP55160 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
NCKAP1LP55160 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NCKAP1LP55160 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
NCKAP1LP55160 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NCKAP1LP55160 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC15.39■□□□□ 0.05
NCKAP1LP55160 AL627422.1-201ENST00000434104 580 ntBASIC15.39■□□□□ 0.05
NCKAP1LP55160 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC15.39■□□□□ 0.05
NCKAP1LP55160 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC15.39■□□□□ 0.05
NCKAP1LP55160 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC15.39■□□□□ 0.05
NCKAP1LP55160 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms