Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 RPS2P36-201ENST00000456516 831 ntBASIC10.39□□□□□ -0.75
APOC4P55056 RN7SL181P-201ENST00000462921 277 ntBASIC10.39□□□□□ -0.75
APOC4P55056 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC10.39□□□□□ -0.75
APOC4P55056 RN7SL767P-201ENST00000493013 295 ntBASIC10.39□□□□□ -0.75
APOC4P55056 ORAOV1P1-201ENST00000503108 395 ntBASIC10.39□□□□□ -0.75
APOC4P55056 SLC25A15P3-201ENST00000505530 290 ntBASIC10.39□□□□□ -0.75
APOC4P55056 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
APOC4P55056 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
APOC4P55056 OR5BD1P-201ENST00000532527 817 ntBASIC10.39□□□□□ -0.75
APOC4P55056 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC10.39□□□□□ -0.75
APOC4P55056 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC10.39□□□□□ -0.75
APOC4P55056 MIR4522-201ENST00000584932 87 ntBASIC10.39□□□□□ -0.75
APOC4P55056 AL021707.6-201ENST00000609212 491 ntBASIC10.39□□□□□ -0.75
APOC4P55056 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
APOC4P55056 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC10.39□□□□□ -0.75
APOC4P55056 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
APOC4P55056 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
APOC4P55056 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
APOC4P55056 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
APOC4P55056 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC10.39□□□□□ -0.75
APOC4P55056 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
APOC4P55056 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
APOC4P55056 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
APOC4P55056 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
APOC4P55056 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC10.39□□□□□ -0.75
APOC4P55056 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
APOC4P55056 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
APOC4P55056 AC140479.7-201ENST00000636301 2332 ntBASIC10.39□□□□□ -0.75
APOC4P55056 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
APOC4P55056 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
APOC4P55056 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
APOC4P55056 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
APOC4P55056 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
APOC4P55056 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
APOC4P55056 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
APOC4P55056 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
APOC4P55056 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
APOC4P55056 HLA-DQB1-202ENST00000399079 1501 ntBASIC10.38□□□□□ -0.75
APOC4P55056 SHMT1P1-201ENST00000419974 1312 ntBASIC10.38□□□□□ -0.75
APOC4P55056 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
APOC4P55056 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
APOC4P55056 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
APOC4P55056 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
APOC4P55056 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
APOC4P55056 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC10.38□□□□□ -0.75
APOC4P55056 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
APOC4P55056 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
APOC4P55056 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
APOC4P55056 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
APOC4P55056 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
APOC4P55056 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
APOC4P55056 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
APOC4P55056 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
APOC4P55056 SOD2-202ENST00000367054 815 ntTSL 2 BASIC10.38□□□□□ -0.75
APOC4P55056 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC10.38□□□□□ -0.75
APOC4P55056 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
APOC4P55056 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
APOC4P55056 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC10.38□□□□□ -0.75
APOC4P55056 AC018638.5-201ENST00000450885 754 ntBASIC10.38□□□□□ -0.75
APOC4P55056 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC10.38□□□□□ -0.75
APOC4P55056 RN7SL8P-201ENST00000461771 266 ntBASIC10.38□□□□□ -0.75
APOC4P55056 AC008267.1-201ENST00000474858 1069 ntBASIC10.38□□□□□ -0.75
APOC4P55056 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC10.38□□□□□ -0.75
APOC4P55056 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC10.38□□□□□ -0.75
APOC4P55056 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC10.38□□□□□ -0.75
APOC4P55056 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC10.38□□□□□ -0.75
APOC4P55056 HERC2P11-201ENST00000562845 725 ntBASIC10.38□□□□□ -0.75
APOC4P55056 AC100756.2-201ENST00000569537 736 ntBASIC10.38□□□□□ -0.75
APOC4P55056 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC10.38□□□□□ -0.75
APOC4P55056 AC007881.3-201ENST00000608897 607 ntBASIC10.38□□□□□ -0.75
APOC4P55056 TP53-221ENST00000615910 1149 ntTSL 5 BASIC10.38□□□□□ -0.75
APOC4P55056 AC242376.2-201ENST00000619355 883 ntBASIC10.38□□□□□ -0.75
APOC4P55056 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
APOC4P55056 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
APOC4P55056 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
APOC4P55056 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
APOC4P55056 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
APOC4P55056 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
APOC4P55056 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
APOC4P55056 AL139158.3-201ENST00000641212 1562 ntBASIC10.38□□□□□ -0.75
APOC4P55056 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
APOC4P55056 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
APOC4P55056 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
APOC4P55056 USP47-202ENST00000339865 7775 ntTSL 2 BASIC10.38□□□□□ -0.75
APOC4P55056 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
APOC4P55056 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC10.38□□□□□ -0.75
APOC4P55056 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
APOC4P55056 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
APOC4P55056 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
APOC4P55056 AC006372.4-201ENST00000624122 1543 ntBASIC10.38□□□□□ -0.75
APOC4P55056 C1R-202ENST00000536053 2347 ntTSL 2 BASIC10.38□□□□□ -0.75
APOC4P55056 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
APOC4P55056 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
APOC4P55056 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
APOC4P55056 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
APOC4P55056 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
APOC4P55056 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC10.37□□□□□ -0.75
APOC4P55056 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
APOC4P55056 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
APOC4P55056 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms