Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 AL359736.1-201ENST00000382141 4157 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
PCP4P48539 BARD1-211ENST00000613706 4153 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
PCP4P48539 APLNR-202ENST00000606794 3609 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
PCP4P48539 TTC27-201ENST00000317907 2876 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
PCP4P48539 NPIPA1-201ENST00000328085 1084 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
PCP4P48539 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
PCP4P48539 ARPC5-202ENST00000359856 7209 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
PCP4P48539 STOML3-201ENST00000379631 2121 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
PCP4P48539 HLA-F-220ENST00000434407 884 ntBASIC9.06□□□□□ -0.96
PCP4P48539 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC9.06□□□□□ -0.96
PCP4P48539 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC9.06□□□□□ -0.96
PCP4P48539 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC9.06□□□□□ -0.96
PCP4P48539 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC9.06□□□□□ -0.96
PCP4P48539 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
PCP4P48539 MLYCD-201ENST00000262430 13038 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
PCP4P48539 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
PCP4P48539 PABPC1-219ENST00000522387 2331 ntTSL 2 BASIC9.06□□□□□ -0.96
PCP4P48539 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
PCP4P48539 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
PCP4P48539 CUL4A-212ENST00000617546 5666 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
PCP4P48539 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
PCP4P48539 RGL1-201ENST00000304685 5100 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
PCP4P48539 CEP85-202ENST00000451429 4061 ntTSL 2 BASIC9.06□□□□□ -0.96
PCP4P48539 NEK6-203ENST00000373600 3619 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
PCP4P48539 AC099489.3-201ENST00000572950 2279 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
PCP4P48539 HHAT-204ENST00000413764 3575 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
PCP4P48539 ZAN-206ENST00000618565 8651 ntAPPRIS P4 TSL 5 BASIC9.06□□□□□ -0.96
PCP4P48539 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC9.05□□□□□ -0.96
PCP4P48539 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
PCP4P48539 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
PCP4P48539 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
PCP4P48539 AL662907.3-201ENST00000641271 1932 ntBASIC9.05□□□□□ -0.96
PCP4P48539 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
PCP4P48539 ZNF723-201ENST00000600766 2400 ntBASIC9.05□□□□□ -0.96
PCP4P48539 UIMC1-212ENST00000511320 2502 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
PCP4P48539 SCAF4-203ENST00000434667 3846 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
PCP4P48539 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
PCP4P48539 ALOX5-207ENST00000542434 2390 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
PCP4P48539 CREB5-203ENST00000396299 2294 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
PCP4P48539 YIPF5-202ENST00000448443 2255 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
PCP4P48539 PCDH9-204ENST00000544246 6234 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
PCP4P48539 FPR1-203ENST00000595042 1965 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
PCP4P48539 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
PCP4P48539 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
PCP4P48539 AC140481.3-201ENST00000450440 1762 ntTSL 2 BASIC9.05□□□□□ -0.96
PCP4P48539 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
PCP4P48539 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC9.05□□□□□ -0.96
PCP4P48539 ZNF263-201ENST00000219069 3830 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
PCP4P48539 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
PCP4P48539 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
PCP4P48539 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
PCP4P48539 MYCLP1-201ENST00000372451 1075 ntBASIC9.05□□□□□ -0.96
PCP4P48539 PMS2P4-201ENST00000412466 1052 ntBASIC9.05□□□□□ -0.96
PCP4P48539 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC9.05□□□□□ -0.96
PCP4P48539 AC105265.2-201ENST00000467189 838 ntBASIC9.05□□□□□ -0.96
PCP4P48539 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC9.05□□□□□ -0.96
PCP4P48539 pRNA.6-201ENST00000610482 90 ntBASIC9.05□□□□□ -0.96
PCP4P48539 pRNA.5-201ENST00000612139 90 ntBASIC9.05□□□□□ -0.96
PCP4P48539 pRNA.11-201ENST00000618423 90 ntBASIC9.05□□□□□ -0.96
PCP4P48539 pRNA.13-201ENST00000619112 90 ntBASIC9.05□□□□□ -0.96
PCP4P48539 TEP1-209ENST00000556935 7643 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
PCP4P48539 ALDH1L1-206ENST00000455064 3137 ntTSL 5 BASIC9.05□□□□□ -0.96
PCP4P48539 MICAL2-203ENST00000379612 6625 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
PCP4P48539 FAM47A-202ENST00000613251 2518 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
PCP4P48539 BHLHB9-201ENST00000361229 3974 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
PCP4P48539 AP001094.2-201ENST00000578897 2315 ntBASIC9.05□□□□□ -0.96
PCP4P48539 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC9.05□□□□□ -0.96
PCP4P48539 AL034417.4-201ENST00000641354 2101 ntBASIC9.05□□□□□ -0.96
PCP4P48539 PADI3-201ENST00000375460 3189 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
PCP4P48539 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC9.05□□□□□ -0.96
PCP4P48539 LRTOMT-202ENST00000307198 3604 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
PCP4P48539 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
PCP4P48539 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
PCP4P48539 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC9.05□□□□□ -0.96
PCP4P48539 CSPG4P10-202ENST00000612093 3411 ntTSL 2 BASIC9.05□□□□□ -0.96
PCP4P48539 PLAC8-201ENST00000311507 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
PCP4P48539 C1orf131-202ENST00000366649 1424 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
PCP4P48539 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC9.05□□□□□ -0.96
PCP4P48539 HDC-202ENST00000543581 2180 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
PCP4P48539 MANBA-201ENST00000226578 2904 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
PCP4P48539 CTCFL-201ENST00000243914 3567 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
PCP4P48539 CIZ1-228ENST00000634901 3462 ntAPPRIS P3 TSL 5 BASIC9.04□□□□□ -0.96
PCP4P48539 MYH10-202ENST00000360416 7762 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
PCP4P48539 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
PCP4P48539 ACBD5-204ENST00000375905 3848 ntAPPRIS P3 TSL 2 BASIC9.04□□□□□ -0.96
PCP4P48539 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
PCP4P48539 NOD2-201ENST00000300589 4486 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
PCP4P48539 LMOD1-202ENST00000616739 3058 ntTSL 5 BASIC9.04□□□□□ -0.96
PCP4P48539 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC9.04□□□□□ -0.96
PCP4P48539 TCF7L2-204ENST00000352065 1553 ntAPPRIS ALT1 TSL 1 (best) BASIC9.04□□□□□ -0.96
PCP4P48539 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
PCP4P48539 TMC3-202ENST00000558726 4644 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
PCP4P48539 ACSBG2-210ENST00000591403 2690 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
PCP4P48539 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
PCP4P48539 CABIN1-214ENST00000617531 7072 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
PCP4P48539 RIMBP2-202ENST00000535703 3685 ntTSL 5 BASIC9.04□□□□□ -0.96
PCP4P48539 SLC7A8-201ENST00000316902 4216 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
PCP4P48539 LYPD6-203ENST00000409381 3578 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
PCP4P48539 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC9.04□□□□□ -0.96
PCP4P48539 EPS8-212ENST00000543523 3925 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms