RNA–Protein interactions for RNA: ENST00000558726.5

TMC3-202, Transcript of transmembrane channel like 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TMC3, Length 4,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC3-202ENST00000558726 NISCHQ9Y2I1 1504 aa19.59■□□□□ 0.73
TMC3-202ENST00000558726 DCAF8L2P0C7V8 631 aa18.17■□□□□ 0.5
TMC3-202ENST00000558726 SUPT5HO00267 1087 aaKnown RBP18.06■□□□□ 0.48
TMC3-202ENST00000558726 SHROOM4Q9ULL8 1493 aa17.88■□□□□ 0.45
TMC3-202ENST00000558726 PCGF6Q9BYE7 350 aa17.24■□□□□ 0.35
TMC3-202ENST00000558726 ZEB1P37275 1124 aaPredicted RBP17.08■□□□□ 0.32
TMC3-202ENST00000558726 HRCP23327 699 aa17■□□□□ 0.31
TMC3-202ENST00000558726 CHIC1Q5VXU3 224 aa16.9■□□□□ 0.3
TMC3-202ENST00000558726 TRIM41Q8WV44 630 aa16.85■□□□□ 0.29
TMC3-202ENST00000558726 EHMT2Q96KQ7 1210 aa16.85■□□□□ 0.29
TMC3-202ENST00000558726 PELP1Q8IZL8 1130 aaKnown RBP16.83■□□□□ 0.28
TMC3-202ENST00000558726 FAM9AQ8IZU1 332 aaPredicted RBP16.82■□□□□ 0.28
TMC3-202ENST00000558726 TRIM26Q12899 539 aaPredicted RBP16.8■□□□□ 0.28
TMC3-202ENST00000558726 CENPBP07199 599 aaPredicted RBP16.68■□□□□ 0.26
TMC3-202ENST00000558726 APLP2Q06481 763 aa16.66■□□□□ 0.26
TMC3-202ENST00000558726 CCER1Q8TC90 406 aaPredicted RBP16.61■□□□□ 0.25
TMC3-202ENST00000558726 LOC105371045A0A1W2PR82 267 aa16.54■□□□□ 0.24
TMC3-202ENST00000558726 ZCCHC6Q5VYS8 1495 aaKnown RBP16.43■□□□□ 0.22
TMC3-202ENST00000558726 MYT1Q01538 1121 aa16.42■□□□□ 0.22
TMC3-202ENST00000558726 PPARGC1BQ86YN6 1023 aaKnown RBP16.4■□□□□ 0.22
TMC3-202ENST00000558726 TTBK1Q5TCY1 1321 aaPredicted RBP16.39■□□□□ 0.21
TMC3-202ENST00000558726 UBTFP17480 764 aaKnown RBP16.34■□□□□ 0.21
TMC3-202ENST00000558726 DCAF1Q9Y4B6 1507 aa16.27■□□□□ 0.2
TMC3-202ENST00000558726 CCDC180Q9P1Z9 1646 aa16.26■□□□□ 0.19
TMC3-202ENST00000558726 YTHDC1Q96MU7 727 aaKnown RBP16.07■□□□□ 0.16
TMC3-202ENST00000558726 RANGAP1P46060 587 aaPredicted RBP16.05■□□□□ 0.16
TMC3-202ENST00000558726 DIEXFQ68CQ4 756 aaKnown RBP16.04■□□□□ 0.16
TMC3-202ENST00000558726 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.03■□□□□ 0.16
TMC3-202ENST00000558726 MYO15BQ96JP2 1530 aa15.98■□□□□ 0.15
TMC3-202ENST00000558726 NEFLP07196 543 aa15.93■□□□□ 0.14
TMC3-202ENST00000558726 HNRNPUL2Q1KMD3 747 aaKnown RBP15.89■□□□□ 0.13
TMC3-202ENST00000558726 ERICH6Q7L0X2 663 aa15.83■□□□□ 0.12
TMC3-202ENST00000558726 ACIN1Q9UKV3 1341 aaKnown RBP15.82■□□□□ 0.12
TMC3-202ENST00000558726 ABCC9O60706 1549 aa15.79■□□□□ 0.12
TMC3-202ENST00000558726 ATP1B4Q9UN42 357 aaPredicted RBP15.79■□□□□ 0.12
TMC3-202ENST00000558726 GTF3C3Q9Y5Q9 886 aa15.79■□□□□ 0.12
TMC3-202ENST00000558726 ZNF316A6NFI3 1004 aaPredicted RBP15.78■□□□□ 0.12
TMC3-202ENST00000558726 SCRIBQ14160 1630 aa15.77■□□□□ 0.11
TMC3-202ENST00000558726 CSRNP3Q8WYN3 585 aa15.72■□□□□ 0.11
TMC3-202ENST00000558726 RSF1Q96T23 1441 aaPredicted RBP15.69■□□□□ 0.1
TMC3-202ENST00000558726 ITGAEP38570 1179 aa15.64■□□□□ 0.09
TMC3-202ENST00000558726 CLSPNQ9HAW4 1339 aa15.58■□□□□ 0.08
TMC3-202ENST00000558726 SCAF1Q9H7N4 1312 aaKnown RBP15.55■□□□□ 0.08
TMC3-202ENST00000558726 RB1CC1Q8TDY2 1594 aa15.53■□□□□ 0.08
TMC3-202ENST00000558726 EEA1Q15075 1411 aa15.51■□□□□ 0.07
TMC3-202ENST00000558726 NEUROD1Q13562 356 aa15.49■□□□□ 0.07
TMC3-202ENST00000558726 PABPN1Q86U42 306 aaKnown RBP eCLIP15.47■□□□□ 0.07
TMC3-202ENST00000558726 NACADO15069 1562 aa15.44■□□□□ 0.06
TMC3-202ENST00000558726 FAM50AQ14320 339 aaKnown RBP15.4■□□□□ 0.06
TMC3-202ENST00000558726 CEP162Q5TB80 1403 aa15.39■□□□□ 0.05
TMC3-202ENST00000558726 TNIKQ9UKE5 1360 aa15.37■□□□□ 0.05
TMC3-202ENST00000558726 ANP32CO43423 234 aa15.36■□□□□ 0.05
TMC3-202ENST00000558726 GOLGA3Q08378 1498 aa15.35■□□□□ 0.05
TMC3-202ENST00000558726 CLIP1P30622 1438 aa15.31■□□□□ 0.04
TMC3-202ENST00000558726 BAZ1AQ9NRL2 1556 aaPredicted RBP15.29■□□□□ 0.04
TMC3-202ENST00000558726 MIER1Q8N108 512 aa15.25■□□□□ 0.03
TMC3-202ENST00000558726 BCANQ96GW7 911 aa15.23■□□□□ 0.03
TMC3-202ENST00000558726 CECR2Q9BXF3 1484 aa15.22■□□□□ 0.03
TMC3-202ENST00000558726 CEP164Q9UPV0 1460 aa15.22■□□□□ 0.03
TMC3-202ENST00000558726 WRNQ14191 1432 aaPredicted RBP eCLIP15.21■□□□□ 0.03
TMC3-202ENST00000558726 CDK11AQ9UQ88 783 aaPredicted RBP15.2■□□□□ 0.02
TMC3-202ENST00000558726 POLR3GLQ9BT43 218 aa15.17■□□□□ 0.02
TMC3-202ENST00000558726 TRIM52Q96A61 297 aa15.16■□□□□ 0.02
TMC3-202ENST00000558726 MROH2BQ7Z745 1585 aa15.14■□□□□ 0.01
TMC3-202ENST00000558726 DAXXQ9UER7 740 aaPredicted RBP15.12■□□□□ 0.01
TMC3-202ENST00000558726 RTL5Q5HYW3 569 aaPredicted RBP15.1■□□□□ 0.01
TMC3-202ENST00000558726 TONSLQ96HA7 1378 aa15.09■□□□□ 0.01
TMC3-202ENST00000558726 FKBP8Q14318 412 aa15.09■□□□□ 0.01
TMC3-202ENST00000558726 DDX10Q13206 875 aaKnown RBP15.06■□□□□ 0
TMC3-202ENST00000558726 SOGA1O94964 1423 aa15.05■□□□□ -0
TMC3-202ENST00000558726 P3H3Q8IVL6 736 aa15.03■□□□□ -0
TMC3-202ENST00000558726 VPS8Q8N3P4 1428 aa15.01□□□□□ -0.01
TMC3-202ENST00000558726 CCDC88BA6NC98 1476 aa15.01□□□□□ -0.01
TMC3-202ENST00000558726 BAZ1BQ9UIG0 1483 aaKnown RBP15□□□□□ -0.01
TMC3-202ENST00000558726 CNGB1Q14028 1251 aaPredicted RBP14.99□□□□□ -0.01
TMC3-202ENST00000558726 TOP2AP11388 1531 aaKnown RBP14.98□□□□□ -0.01
TMC3-202ENST00000558726 KIF27Q86VH2 1401 aa14.97□□□□□ -0.01
TMC3-202ENST00000558726 WIZO95785 1651 aa14.96□□□□□ -0.01
TMC3-202ENST00000558726 ABCC8Q09428 1581 aa14.96□□□□□ -0.01
TMC3-202ENST00000558726 MYT1LQ9UL68 1186 aa14.96□□□□□ -0.01
TMC3-202ENST00000558726 HNRNPUQ00839 825 aaKnown RBP eCLIP14.94□□□□□ -0.02
TMC3-202ENST00000558726 CCNB3Q8WWL7 1395 aa14.89□□□□□ -0.03
TMC3-202ENST00000558726 TIMELESSQ9UNS1 1208 aa14.89□□□□□ -0.03
TMC3-202ENST00000558726 ANP32AP39687 249 aaKnown RBP14.88□□□□□ -0.03
TMC3-202ENST00000558726 MTUS2Q5JR59 1369 aa14.87□□□□□ -0.03
TMC3-202ENST00000558726 SUPT16HQ9Y5B9 1047 aaKnown RBP14.86□□□□□ -0.03
TMC3-202ENST00000558726 ZNF326Q5BKZ1 582 aaKnown RBP14.86□□□□□ -0.03
TMC3-202ENST00000558726 ANP32EQ9BTT0 268 aa14.83□□□□□ -0.03
TMC3-202ENST00000558726 FHAD1B1AJZ9 1412 aa14.8□□□□□ -0.04
TMC3-202ENST00000558726 EIF4G2P78344 907 aaKnown RBP eCLIP14.8□□□□□ -0.04
TMC3-202ENST00000558726 FAM9BQ8IZU0 186 aa14.78□□□□□ -0.04
TMC3-202ENST00000558726 SMARCA2P51531 1590 aa14.77□□□□□ -0.05
TMC3-202ENST00000558726 SMARCA4P51532 1647 aa14.77□□□□□ -0.05
TMC3-202ENST00000558726 CCER2I3L3R5 266 aa14.76□□□□□ -0.05
TMC3-202ENST00000558726 MRS2Q9HD23 443 aa14.76□□□□□ -0.05
TMC3-202ENST00000558726 SETD5Q9C0A6 1442 aa14.74□□□□□ -0.05
TMC3-202ENST00000558726 HIRIP3Q9BW71 556 aaPredicted RBP14.73□□□□□ -0.05
TMC3-202ENST00000558726 CHIC2Q9UKJ5 165 aa14.71□□□□□ -0.05
TMC3-202ENST00000558726 CCDC136Q96JN2 1154 aa14.7□□□□□ -0.06
TMC3-202ENST00000558726 SIN3AQ96ST3 1273 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms