Protein–RNA interactions for Protein: P28223

HTR2A, 5-hydroxytryptamine receptor 2A, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR2AP28223 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
HTR2AP28223 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
HTR2AP28223 AC061965.1-201ENST00000560524 1465 ntBASIC13.03□□□□□ -0.32
HTR2AP28223 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
HTR2AP28223 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.03□□□□□ -0.32
HTR2AP28223 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.03□□□□□ -0.32
HTR2AP28223 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
HTR2AP28223 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
HTR2AP28223 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HTR2AP28223 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
HTR2AP28223 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
HTR2AP28223 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.03□□□□□ -0.32
HTR2AP28223 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HTR2AP28223 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
HTR2AP28223 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
HTR2AP28223 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC13.02□□□□□ -0.32
HTR2AP28223 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
HTR2AP28223 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
HTR2AP28223 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HTR2AP28223 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
HTR2AP28223 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HTR2AP28223 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC13.02□□□□□ -0.32
HTR2AP28223 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HTR2AP28223 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
HTR2AP28223 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
HTR2AP28223 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
HTR2AP28223 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.02□□□□□ -0.32
HTR2AP28223 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
HTR2AP28223 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC13.02□□□□□ -0.32
HTR2AP28223 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
HTR2AP28223 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HTR2AP28223 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
HTR2AP28223 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HTR2AP28223 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HTR2AP28223 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HTR2AP28223 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.02□□□□□ -0.33
HTR2AP28223 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
HTR2AP28223 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HTR2AP28223 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HTR2AP28223 MIR663B-201ENST00000408361 115 ntBASIC13.02□□□□□ -0.33
HTR2AP28223 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.02□□□□□ -0.33
HTR2AP28223 FAM21FP-201ENST00000426241 1131 ntBASIC13.02□□□□□ -0.33
HTR2AP28223 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.02□□□□□ -0.33
HTR2AP28223 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HTR2AP28223 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC13.02□□□□□ -0.33
HTR2AP28223 BNIP3P42-201ENST00000454982 569 ntBASIC13.02□□□□□ -0.33
HTR2AP28223 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HTR2AP28223 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.02□□□□□ -0.33
HTR2AP28223 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HTR2AP28223 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.02□□□□□ -0.33
HTR2AP28223 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.02□□□□□ -0.33
HTR2AP28223 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.02□□□□□ -0.33
HTR2AP28223 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
HTR2AP28223 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.02□□□□□ -0.33
HTR2AP28223 BNIP3P29-201ENST00000598302 571 ntBASIC13.02□□□□□ -0.33
HTR2AP28223 BNIP3P13-201ENST00000599968 566 ntBASIC13.02□□□□□ -0.33
HTR2AP28223 AC011447.5-201ENST00000616168 564 ntBASIC13.02□□□□□ -0.33
HTR2AP28223 AC022748.3-201ENST00000621828 275 ntBASIC13.02□□□□□ -0.33
HTR2AP28223 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
HTR2AP28223 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
HTR2AP28223 AC063926.2-201ENST00000623766 1308 ntBASIC13.02□□□□□ -0.33
HTR2AP28223 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HTR2AP28223 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
HTR2AP28223 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HTR2AP28223 AC027612.1-201ENST00000445234 2395 ntBASIC13.02□□□□□ -0.33
HTR2AP28223 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
HTR2AP28223 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.02□□□□□ -0.33
HTR2AP28223 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HTR2AP28223 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
HTR2AP28223 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
HTR2AP28223 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.02□□□□□ -0.33
HTR2AP28223 AC004899.1-201ENST00000424687 1714 ntBASIC13.02□□□□□ -0.33
HTR2AP28223 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
HTR2AP28223 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HTR2AP28223 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HTR2AP28223 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
HTR2AP28223 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.01□□□□□ -0.33
HTR2AP28223 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.01□□□□□ -0.33
HTR2AP28223 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HTR2AP28223 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HTR2AP28223 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.01□□□□□ -0.33
HTR2AP28223 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
HTR2AP28223 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HTR2AP28223 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
HTR2AP28223 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HTR2AP28223 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
HTR2AP28223 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HTR2AP28223 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HTR2AP28223 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
HTR2AP28223 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
HTR2AP28223 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.01□□□□□ -0.33
HTR2AP28223 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
HTR2AP28223 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
HTR2AP28223 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HTR2AP28223 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HTR2AP28223 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
HTR2AP28223 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
HTR2AP28223 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HTR2AP28223 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.01□□□□□ -0.33
HTR2AP28223 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms