Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC005740.1-201ENST00000515639 522 ntBASIC11.97□□□□□ -0.49
COL8A2P25067 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
COL8A2P25067 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC11.97□□□□□ -0.49
COL8A2P25067 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC11.97□□□□□ -0.49
COL8A2P25067 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC11.97□□□□□ -0.49
COL8A2P25067 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC11.97□□□□□ -0.49
COL8A2P25067 AL031713.1-201ENST00000564813 661 ntBASIC11.97□□□□□ -0.49
COL8A2P25067 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
COL8A2P25067 AL133467.4-201ENST00000602953 725 ntBASIC11.97□□□□□ -0.49
COL8A2P25067 U62317.3-201ENST00000608319 855 ntBASIC11.97□□□□□ -0.49
COL8A2P25067 AC087392.5-201ENST00000612517 489 ntBASIC11.97□□□□□ -0.49
COL8A2P25067 AC084781.1-201ENST00000613737 656 ntBASIC11.97□□□□□ -0.49
COL8A2P25067 MIR7845-201ENST00000618396 99 ntBASIC11.97□□□□□ -0.49
COL8A2P25067 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
COL8A2P25067 AC011491.1-203ENST00000637688 543 ntBASIC11.97□□□□□ -0.49
COL8A2P25067 AP001184.1-201ENST00000637936 376 ntBASIC11.97□□□□□ -0.49
COL8A2P25067 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC11.97□□□□□ -0.49
COL8A2P25067 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC11.97□□□□□ -0.49
COL8A2P25067 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
COL8A2P25067 KCP-203ENST00000610776 5108 ntTSL 5 BASIC11.97□□□□□ -0.49
COL8A2P25067 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
COL8A2P25067 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC11.97□□□□□ -0.49
COL8A2P25067 AC067750.1-201ENST00000608826 6545 ntBASIC11.97□□□□□ -0.49
COL8A2P25067 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC11.97□□□□□ -0.49
COL8A2P25067 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC11.97□□□□□ -0.49
COL8A2P25067 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
COL8A2P25067 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC11.97□□□□□ -0.49
COL8A2P25067 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
COL8A2P25067 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
COL8A2P25067 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
COL8A2P25067 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
COL8A2P25067 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
COL8A2P25067 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC11.97□□□□□ -0.49
COL8A2P25067 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
COL8A2P25067 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
COL8A2P25067 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
COL8A2P25067 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC11.97□□□□□ -0.49
COL8A2P25067 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC11.96□□□□□ -0.49
COL8A2P25067 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
COL8A2P25067 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
COL8A2P25067 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
COL8A2P25067 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC11.96□□□□□ -0.49
COL8A2P25067 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC11.96□□□□□ -0.49
COL8A2P25067 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC11.96□□□□□ -0.49
COL8A2P25067 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
COL8A2P25067 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
COL8A2P25067 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
COL8A2P25067 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC11.96□□□□□ -0.49
COL8A2P25067 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
COL8A2P25067 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
COL8A2P25067 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
COL8A2P25067 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
COL8A2P25067 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
COL8A2P25067 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC11.96□□□□□ -0.49
COL8A2P25067 TEKT4P2-202ENST00000559466 1312 ntBASIC11.96□□□□□ -0.49
COL8A2P25067 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
COL8A2P25067 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
COL8A2P25067 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
COL8A2P25067 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
COL8A2P25067 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC11.96□□□□□ -0.49
COL8A2P25067 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
COL8A2P25067 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC11.96□□□□□ -0.49
COL8A2P25067 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
COL8A2P25067 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
COL8A2P25067 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC11.96□□□□□ -0.49
COL8A2P25067 HLA-DMA-203ENST00000395305 777 ntBASIC11.96□□□□□ -0.49
COL8A2P25067 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
COL8A2P25067 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC11.96□□□□□ -0.49
COL8A2P25067 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC11.96□□□□□ -0.49
COL8A2P25067 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
COL8A2P25067 RPL7P35-201ENST00000446943 740 ntBASIC11.96□□□□□ -0.49
COL8A2P25067 ORAOV1P1-201ENST00000503108 395 ntBASIC11.96□□□□□ -0.49
COL8A2P25067 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC11.96□□□□□ -0.49
COL8A2P25067 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC11.96□□□□□ -0.49
COL8A2P25067 MT3-203ENST00000565838 421 ntTSL 3 BASIC11.96□□□□□ -0.49
COL8A2P25067 RPL17P45-201ENST00000586289 509 ntBASIC11.96□□□□□ -0.49
COL8A2P25067 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC11.96□□□□□ -0.49
COL8A2P25067 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC11.96□□□□□ -0.49
COL8A2P25067 AC007881.3-201ENST00000608897 607 ntBASIC11.96□□□□□ -0.49
COL8A2P25067 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
COL8A2P25067 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
COL8A2P25067 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
COL8A2P25067 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
COL8A2P25067 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
COL8A2P25067 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
COL8A2P25067 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
COL8A2P25067 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
COL8A2P25067 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
COL8A2P25067 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
COL8A2P25067 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
COL8A2P25067 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
COL8A2P25067 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC11.96□□□□□ -0.5
COL8A2P25067 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC11.96□□□□□ -0.5
COL8A2P25067 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
COL8A2P25067 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
COL8A2P25067 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
COL8A2P25067 AC006372.4-201ENST00000624122 1543 ntBASIC11.96□□□□□ -0.5
COL8A2P25067 CICP16-201ENST00000502609 2813 ntBASIC11.96□□□□□ -0.5
COL8A2P25067 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
COL8A2P25067 TKT-201ENST00000296289 1931 ntTSL 5 BASIC11.96□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms