Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 AC130686.1-201ENST00000622936 2466 ntBASIC14.3□□□□□ -0.12
HLA-DPA1P20036 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 MIR1247-201ENST00000408206 136 ntBASIC14.3□□□□□ -0.12
HLA-DPA1P20036 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 BX284668.4-201ENST00000453917 508 ntBASIC14.3□□□□□ -0.12
HLA-DPA1P20036 DUX4L50-201ENST00000455245 715 ntBASIC14.3□□□□□ -0.12
HLA-DPA1P20036 ZNF767P-206ENST00000513792 565 ntBASIC14.3□□□□□ -0.12
HLA-DPA1P20036 AC090857.1-201ENST00000527400 390 ntBASIC14.3□□□□□ -0.12
HLA-DPA1P20036 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 AC244093.1-201ENST00000610837 814 ntBASIC14.3□□□□□ -0.12
HLA-DPA1P20036 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 FRMPD2B-201ENST00000431305 1347 ntBASIC14.3□□□□□ -0.12
HLA-DPA1P20036 TUBBP5-203ENST00000508529 1334 ntBASIC14.3□□□□□ -0.12
HLA-DPA1P20036 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HLA-DPA1P20036 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 GPAA1P2-201ENST00000417923 928 ntBASIC14.29□□□□□ -0.12
HLA-DPA1P20036 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 KRT8P1-201ENST00000557533 1207 ntBASIC14.29□□□□□ -0.12
HLA-DPA1P20036 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 MIR6787-201ENST00000616675 61 ntBASIC14.29□□□□□ -0.12
HLA-DPA1P20036 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DPA1P20036 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms