Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.1■□□□□ 0.01
FAM228BP0C875 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
FAM228BP0C875 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
FAM228BP0C875 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.1■□□□□ 0.01
FAM228BP0C875 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FAM228BP0C875 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FAM228BP0C875 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FAM228BP0C875 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.1■□□□□ 0.01
FAM228BP0C875 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
FAM228BP0C875 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FAM228BP0C875 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FAM228BP0C875 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
FAM228BP0C875 HLA-V-201ENST00000429037 534 ntBASIC15.1■□□□□ 0.01
FAM228BP0C875 POM121L10P-201ENST00000436994 1285 ntBASIC15.1■□□□□ 0.01
FAM228BP0C875 HSPB1P2-201ENST00000448722 546 ntBASIC15.1■□□□□ 0.01
FAM228BP0C875 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.1■□□□□ 0.01
FAM228BP0C875 AC104989.1-201ENST00000519711 778 ntBASIC15.1■□□□□ 0.01
FAM228BP0C875 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FAM228BP0C875 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.1■□□□□ 0.01
FAM228BP0C875 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC15.1■□□□□ 0.01
FAM228BP0C875 MIR6775-201ENST00000617557 69 ntBASIC15.1■□□□□ 0.01
FAM228BP0C875 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.1■□□□□ 0.01
FAM228BP0C875 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC15.1■□□□□ 0.01
FAM228BP0C875 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
FAM228BP0C875 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FAM228BP0C875 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FAM228BP0C875 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FAM228BP0C875 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
FAM228BP0C875 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
FAM228BP0C875 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
FAM228BP0C875 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FAM228BP0C875 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FAM228BP0C875 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC15.1■□□□□ 0.01
FAM228BP0C875 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
FAM228BP0C875 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC15.1■□□□□ 0.01
FAM228BP0C875 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
FAM228BP0C875 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
FAM228BP0C875 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC15.09■□□□□ 0.01
FAM228BP0C875 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
FAM228BP0C875 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC15.09■□□□□ 0.01
FAM228BP0C875 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FAM228BP0C875 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FAM228BP0C875 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FAM228BP0C875 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC15.09■□□□□ 0.01
FAM228BP0C875 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC15.09■□□□□ 0.01
FAM228BP0C875 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FAM228BP0C875 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FAM228BP0C875 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
FAM228BP0C875 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.09■□□□□ 0.01
FAM228BP0C875 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FAM228BP0C875 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.09■□□□□ 0.01
FAM228BP0C875 PARVG-202ENST00000415224 999 ntTSL 2 BASIC15.09■□□□□ 0.01
FAM228BP0C875 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.09■□□□□ 0.01
FAM228BP0C875 RNMTL1P1-201ENST00000454103 560 ntBASIC15.09■□□□□ 0.01
FAM228BP0C875 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FAM228BP0C875 HLA-J-204ENST00000495278 958 ntBASIC15.09■□□□□ 0.01
FAM228BP0C875 GOLGA2P8-201ENST00000505201 779 ntBASIC15.09■□□□□ 0.01
FAM228BP0C875 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.09■□□□□ 0.01
FAM228BP0C875 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC15.09■□□□□ 0.01
FAM228BP0C875 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.09■□□□□ 0.01
FAM228BP0C875 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.09■□□□□ 0.01
FAM228BP0C875 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.09■□□□□ 0.01
FAM228BP0C875 AP000346.4-201ENST00000614827 381 ntBASIC15.09■□□□□ 0.01
FAM228BP0C875 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
FAM228BP0C875 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.09■□□□□ 0.01
FAM228BP0C875 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FAM228BP0C875 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
FAM228BP0C875 AL139158.3-201ENST00000641212 1562 ntBASIC15.09■□□□□ 0.01
FAM228BP0C875 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC15.09■□□□□ 0.01
FAM228BP0C875 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
FAM228BP0C875 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC15.09■□□□□ 0.01
FAM228BP0C875 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC15.09■□□□□ 0.01
FAM228BP0C875 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
FAM228BP0C875 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FAM228BP0C875 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
FAM228BP0C875 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC15.09■□□□□ 0.01
FAM228BP0C875 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.09■□□□□ 0.01
FAM228BP0C875 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
FAM228BP0C875 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC15.08■□□□□ 0.01
FAM228BP0C875 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
FAM228BP0C875 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
FAM228BP0C875 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
FAM228BP0C875 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC15.08■□□□□ 0.01
FAM228BP0C875 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC15.08■□□□□ 0.01
FAM228BP0C875 AC026271.4-201ENST00000578214 1833 ntBASIC15.08■□□□□ 0.01
FAM228BP0C875 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
FAM228BP0C875 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
FAM228BP0C875 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
FAM228BP0C875 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC15.08■□□□□ 0
FAM228BP0C875 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC15.08■□□□□ 0
FAM228BP0C875 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC15.08■□□□□ 0
FAM228BP0C875 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
FAM228BP0C875 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
FAM228BP0C875 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
FAM228BP0C875 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
FAM228BP0C875 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
FAM228BP0C875 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
FAM228BP0C875 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
FAM228BP0C875 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
FAM228BP0C875 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms