Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
TRGV3P03979 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
TRGV3P03979 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
TRGV3P03979 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
TRGV3P03979 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
TRGV3P03979 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
TRGV3P03979 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.62
TRGV3P03979 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
TRGV3P03979 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
TRGV3P03979 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.62
TRGV3P03979 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC11.2□□□□□ -0.62
TRGV3P03979 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV3P03979 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC11.2□□□□□ -0.62
TRGV3P03979 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC11.2□□□□□ -0.62
TRGV3P03979 AL157791.1-201ENST00000553667 1699 ntBASIC11.2□□□□□ -0.62
TRGV3P03979 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV3P03979 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV3P03979 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC11.2□□□□□ -0.62
TRGV3P03979 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV3P03979 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
TRGV3P03979 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC11.2□□□□□ -0.62
TRGV3P03979 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV3P03979 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
TRGV3P03979 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV3P03979 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
TRGV3P03979 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC11.2□□□□□ -0.62
TRGV3P03979 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV3P03979 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV3P03979 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV3P03979 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
TRGV3P03979 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV3P03979 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV3P03979 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV3P03979 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV3P03979 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
TRGV3P03979 NCR3-202ENST00000376071 541 ntTSL 5 BASIC11.2□□□□□ -0.62
TRGV3P03979 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV3P03979 AC016700.1-201ENST00000429424 312 ntBASIC11.2□□□□□ -0.62
TRGV3P03979 AC092580.1-201ENST00000433998 658 ntBASIC11.2□□□□□ -0.62
TRGV3P03979 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC11.2□□□□□ -0.62
TRGV3P03979 AKR7A2P1-201ENST00000460134 915 ntBASIC11.2□□□□□ -0.62
TRGV3P03979 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC11.2□□□□□ -0.62
TRGV3P03979 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC11.2□□□□□ -0.62
TRGV3P03979 AL512310.5-201ENST00000551999 515 ntBASIC11.2□□□□□ -0.62
TRGV3P03979 MIR3615-201ENST00000581999 87 ntBASIC11.2□□□□□ -0.62
TRGV3P03979 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC11.2□□□□□ -0.62
TRGV3P03979 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
TRGV3P03979 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV3P03979 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
TRGV3P03979 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV3P03979 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV3P03979 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV3P03979 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV3P03979 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV3P03979 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV3P03979 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC11.2□□□□□ -0.62
TRGV3P03979 AL137784.3-201ENST00000623858 2288 ntBASIC11.2□□□□□ -0.62
TRGV3P03979 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
TRGV3P03979 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV3P03979 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC11.2□□□□□ -0.62
TRGV3P03979 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV3P03979 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC11.2□□□□□ -0.62
TRGV3P03979 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
TRGV3P03979 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
TRGV3P03979 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV3P03979 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV3P03979 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC11.19□□□□□ -0.62
TRGV3P03979 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV3P03979 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC11.19□□□□□ -0.62
TRGV3P03979 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV3P03979 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
TRGV3P03979 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV3P03979 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV3P03979 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC11.19□□□□□ -0.62
TRGV3P03979 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV3P03979 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV3P03979 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV3P03979 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC11.19□□□□□ -0.62
TRGV3P03979 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV3P03979 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV3P03979 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV3P03979 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV3P03979 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC11.19□□□□□ -0.62
TRGV3P03979 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV3P03979 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC11.19□□□□□ -0.62
TRGV3P03979 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV3P03979 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV3P03979 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
TRGV3P03979 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRGV3P03979 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
TRGV3P03979 MIR769-201ENST00000390225 118 ntBASIC11.19□□□□□ -0.62
TRGV3P03979 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC11.19□□□□□ -0.62
TRGV3P03979 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC11.19□□□□□ -0.62
TRGV3P03979 SDHD-202ENST00000525291 790 ntTSL 3 BASIC11.19□□□□□ -0.62
TRGV3P03979 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC11.19□□□□□ -0.62
TRGV3P03979 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
TRGV3P03979 PAM16-211ENST00000575848 518 ntTSL 3 BASIC11.19□□□□□ -0.62
TRGV3P03979 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
TRGV3P03979 MIR3188-201ENST00000583494 85 ntBASIC11.19□□□□□ -0.62
TRGV3P03979 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC11.19□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms