Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRBV12-3P01733 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TRBV12-3P01733 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC10.95□□□□□ -0.66
TRBV12-3P01733 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TRBV12-3P01733 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRBV12-3P01733 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
TRBV12-3P01733 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRBV12-3P01733 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRBV12-3P01733 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRBV12-3P01733 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC10.95□□□□□ -0.66
TRBV12-3P01733 OR2K2-202ENST00000374428 1038 ntBASIC10.95□□□□□ -0.66
TRBV12-3P01733 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRBV12-3P01733 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRBV12-3P01733 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TRBV12-3P01733 PTPA-217ENST00000434095 870 ntTSL 2 BASIC10.95□□□□□ -0.66
TRBV12-3P01733 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC10.95□□□□□ -0.66
TRBV12-3P01733 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC10.95□□□□□ -0.66
TRBV12-3P01733 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC10.95□□□□□ -0.66
TRBV12-3P01733 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC10.95□□□□□ -0.66
TRBV12-3P01733 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
TRBV12-3P01733 RTN3P1-201ENST00000536295 711 ntBASIC10.95□□□□□ -0.66
TRBV12-3P01733 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC10.95□□□□□ -0.66
TRBV12-3P01733 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC10.95□□□□□ -0.66
TRBV12-3P01733 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TRBV12-3P01733 ELP5-212ENST00000574255 671 ntTSL 2 BASIC10.95□□□□□ -0.66
TRBV12-3P01733 MIR3619-201ENST00000579667 83 ntBASIC10.95□□□□□ -0.66
TRBV12-3P01733 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC10.95□□□□□ -0.66
TRBV12-3P01733 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
TRBV12-3P01733 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC10.95□□□□□ -0.66
TRBV12-3P01733 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC10.95□□□□□ -0.66
TRBV12-3P01733 LINC01783-202ENST00000614408 828 ntBASIC10.95□□□□□ -0.66
TRBV12-3P01733 BX284668.2-205ENST00000619677 828 ntBASIC10.95□□□□□ -0.66
TRBV12-3P01733 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRBV12-3P01733 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC10.95□□□□□ -0.66
TRBV12-3P01733 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TRBV12-3P01733 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRBV12-3P01733 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC10.95□□□□□ -0.66
TRBV12-3P01733 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC10.95□□□□□ -0.66
TRBV12-3P01733 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TRBV12-3P01733 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
TRBV12-3P01733 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRBV12-3P01733 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
TRBV12-3P01733 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TRBV12-3P01733 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
TRBV12-3P01733 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC10.95□□□□□ -0.66
TRBV12-3P01733 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TRBV12-3P01733 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRBV12-3P01733 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
TRBV12-3P01733 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRBV12-3P01733 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRBV12-3P01733 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC10.94□□□□□ -0.66
TRBV12-3P01733 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
TRBV12-3P01733 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC10.94□□□□□ -0.66
TRBV12-3P01733 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRBV12-3P01733 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC10.94□□□□□ -0.66
TRBV12-3P01733 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
TRBV12-3P01733 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRBV12-3P01733 GOLGA8IP-202ENST00000611635 2100 ntBASIC10.94□□□□□ -0.66
TRBV12-3P01733 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRBV12-3P01733 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TRBV12-3P01733 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC10.94□□□□□ -0.66
TRBV12-3P01733 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRBV12-3P01733 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRBV12-3P01733 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC10.94□□□□□ -0.66
TRBV12-3P01733 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TRBV12-3P01733 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
TRBV12-3P01733 MAPT-IT1-201ENST00000624111 3016 ntBASIC10.94□□□□□ -0.66
TRBV12-3P01733 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TRBV12-3P01733 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
TRBV12-3P01733 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRBV12-3P01733 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TRBV12-3P01733 SHMT1P1-201ENST00000419974 1312 ntBASIC10.94□□□□□ -0.66
TRBV12-3P01733 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TRBV12-3P01733 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRBV12-3P01733 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
TRBV12-3P01733 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
TRBV12-3P01733 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TRBV12-3P01733 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC10.94□□□□□ -0.66
TRBV12-3P01733 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TRBV12-3P01733 BANF1P3-201ENST00000412556 261 ntBASIC10.94□□□□□ -0.66
TRBV12-3P01733 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC10.94□□□□□ -0.66
TRBV12-3P01733 SLC25A24P2-201ENST00000415059 510 ntBASIC10.94□□□□□ -0.66
TRBV12-3P01733 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
TRBV12-3P01733 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC10.94□□□□□ -0.66
TRBV12-3P01733 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC10.94□□□□□ -0.66
TRBV12-3P01733 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TRBV12-3P01733 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC10.94□□□□□ -0.66
TRBV12-3P01733 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC10.94□□□□□ -0.66
TRBV12-3P01733 AC006335.1-201ENST00000445200 547 ntBASIC10.94□□□□□ -0.66
TRBV12-3P01733 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC10.94□□□□□ -0.66
TRBV12-3P01733 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC10.94□□□□□ -0.66
TRBV12-3P01733 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC10.94□□□□□ -0.66
TRBV12-3P01733 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC10.94□□□□□ -0.66
TRBV12-3P01733 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
TRBV12-3P01733 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
TRBV12-3P01733 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC10.94□□□□□ -0.66
TRBV12-3P01733 FGFR3P5-201ENST00000564496 886 ntBASIC10.94□□□□□ -0.66
TRBV12-3P01733 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC10.94□□□□□ -0.66
TRBV12-3P01733 PHBP15-201ENST00000574228 665 ntBASIC10.94□□□□□ -0.66
TRBV12-3P01733 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC10.94□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms