Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
O00370 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
O00370 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
O00370 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
O00370 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
O00370 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC15.11■□□□□ 0.01
O00370 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
O00370 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.11■□□□□ 0.01
O00370 HMGA1P1-201ENST00000415560 1062 ntBASIC15.11■□□□□ 0.01
O00370 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC15.11■□□□□ 0.01
O00370 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
O00370 ADM-202ENST00000524948 584 ntTSL 2 BASIC15.11■□□□□ 0.01
O00370 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
O00370 HPN-206ENST00000597419 1212 ntTSL 5 BASIC15.11■□□□□ 0.01
O00370 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
O00370 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
O00370 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
O00370 CR383656.2-201ENST00000548656 2254 ntBASIC15.11■□□□□ 0.01
O00370 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
O00370 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
O00370 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
O00370 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC15.11■□□□□ 0.01
O00370 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
O00370 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
O00370 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
O00370 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC15.11■□□□□ 0.01
O00370 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
O00370 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
O00370 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC15.11■□□□□ 0.01
O00370 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
O00370 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
O00370 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.11■□□□□ 0.01
O00370 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC15.11■□□□□ 0.01
O00370 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
O00370 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
O00370 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
O00370 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
O00370 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
O00370 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
O00370 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
O00370 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
O00370 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC15.1■□□□□ 0.01
O00370 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
O00370 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.1■□□□□ 0.01
O00370 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
O00370 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC15.1■□□□□ 0.01
O00370 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
O00370 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
O00370 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
O00370 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
O00370 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
O00370 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
O00370 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
O00370 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
O00370 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
O00370 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC15.1■□□□□ 0.01
O00370 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC15.1■□□□□ 0.01
O00370 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
O00370 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
O00370 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
O00370 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
O00370 MIR769-201ENST00000390225 118 ntBASIC15.1■□□□□ 0.01
O00370 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
O00370 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
O00370 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15.1■□□□□ 0.01
O00370 OR8T1P-201ENST00000421347 918 ntBASIC15.1■□□□□ 0.01
O00370 DUX4L50-201ENST00000455245 715 ntBASIC15.1■□□□□ 0.01
O00370 RN7SL11P-201ENST00000471305 293 ntBASIC15.1■□□□□ 0.01
O00370 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
O00370 AC024681.1-201ENST00000521917 487 ntBASIC15.1■□□□□ 0.01
O00370 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC15.1■□□□□ 0.01
O00370 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
O00370 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15.1■□□□□ 0.01
O00370 GOLGA8EP-201ENST00000530246 1959 ntBASIC15.1■□□□□ 0.01
O00370 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
O00370 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
O00370 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
O00370 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.1■□□□□ 0.01
O00370 AC073869.1-201ENST00000415574 2762 ntBASIC15.1■□□□□ 0.01
O00370 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
O00370 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
O00370 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
O00370 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
O00370 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
O00370 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
O00370 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
O00370 AC073548.1-201ENST00000624088 1882 ntBASIC15.1■□□□□ 0.01
O00370 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC15.1■□□□□ 0.01
O00370 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
O00370 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC15.09■□□□□ 0.01
O00370 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC15.09■□□□□ 0.01
O00370 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
O00370 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
O00370 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
O00370 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC15.09■□□□□ 0.01
O00370 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
O00370 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
O00370 RPL13AP3-202ENST00000494676 1473 ntBASIC15.09■□□□□ 0.01
O00370 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC15.09■□□□□ 0.01
O00370 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms