Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 AC092978.1-202ENST00000637590 1327 ntBASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 NAGK-204ENST00000443872 878 ntTSL 3 BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 AP002803.1-201ENST00000528836 498 ntBASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 AL031713.1-201ENST00000564813 661 ntBASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 MIR4522-201ENST00000584932 87 ntBASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 AC005632.3-201ENST00000605544 308 ntBASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 AC087045.2-201ENST00000606279 1003 ntBASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 AC242376.2-201ENST00000619355 883 ntBASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 AC011491.1-203ENST00000637688 543 ntBASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 KRT8P31-201ENST00000504812 1408 ntBASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA3F8WFD2 MARK2P16-201ENST00000605714 1723 ntBASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 RPL17P11-201ENST00000417593 544 ntBASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 AC092580.1-201ENST00000433998 658 ntBASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 AL627422.1-201ENST00000434104 580 ntBASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 AC135983.4-201ENST00000564116 1262 ntBASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 AC138894.2-201ENST00000602838 371 ntBASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 RN7SL736P-201ENST00000613111 269 ntBASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
NPIPA3F8WFD2 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms