Protein–RNA interactions for Protein: A6NEF3

GOLGA6L4, Golgin subfamily A member 6-like protein 4, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GOLGA6L4A6NEF3 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 AC005229.1-201ENST00000392885 409 ntBASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 AC236430.1-201ENST00000402231 743 ntBASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 AL136309.1-201ENST00000403917 691 ntBASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 GNRHR2-203ENST00000581100 1187 ntBASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 CR392039.2-201ENST00000623182 509 ntBASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 F2-205ENST00000530231 1849 ntTSL 5 BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 LAP3P2-201ENST00000454686 1454 ntBASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 AP006294.1-201ENST00000415407 339 ntBASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 AC112492.5-201ENST00000421897 457 ntBASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 AC002472.2-201ENST00000442739 958 ntBASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 AC092183.1-201ENST00000469884 875 ntBASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 OS9-218ENST00000551035 2246 ntTSL 2 BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 AC073869.1-201ENST00000415574 2762 ntBASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 KRT8P4-201ENST00000509735 1454 ntBASIC16.42■□□□□ 0.22
GOLGA6L4A6NEF3 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
GOLGA6L4A6NEF3 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC16.41■□□□□ 0.22
GOLGA6L4A6NEF3 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GOLGA6L4A6NEF3 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
GOLGA6L4A6NEF3 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GOLGA6L4A6NEF3 AC090114.2-201ENST00000608477 7054 ntBASIC16.41■□□□□ 0.22
GOLGA6L4A6NEF3 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms