Protein–RNA interactions for Protein: Q9C030

TRIM6, Tripartite motif-containing protein 6, humanhuman

Predicted RBP Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6Q9C030 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM6Q9C030 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM6Q9C030 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM6Q9C030 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM6Q9C030 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM6Q9C030 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM6Q9C030 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM6Q9C030 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM6Q9C030 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM6Q9C030 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM6Q9C030 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM6Q9C030 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM6Q9C030 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TRIM6Q9C030 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM6Q9C030 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM6Q9C030 RPS9P1-201ENST00000419943 583 ntBASIC15.65■□□□□ 0.1
TRIM6Q9C030 AL807761.2-201ENST00000422849 729 ntBASIC15.65■□□□□ 0.1
TRIM6Q9C030 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM6Q9C030 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC15.65■□□□□ 0.1
TRIM6Q9C030 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM6Q9C030 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC15.65■□□□□ 0.1
TRIM6Q9C030 AC114947.1-202ENST00000514136 344 ntBASIC15.65■□□□□ 0.1
TRIM6Q9C030 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM6Q9C030 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC15.65■□□□□ 0.1
TRIM6Q9C030 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TRIM6Q9C030 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRIM6Q9C030 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM6Q9C030 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM6Q9C030 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM6Q9C030 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRIM6Q9C030 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM6Q9C030 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM6Q9C030 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM6Q9C030 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM6Q9C030 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM6Q9C030 MARK2P16-201ENST00000605714 1723 ntBASIC15.65■□□□□ 0.1
TRIM6Q9C030 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
TRIM6Q9C030 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM6Q9C030 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM6Q9C030 AC006480.2-201ENST00000609770 1337 ntBASIC15.65■□□□□ 0.1
TRIM6Q9C030 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM6Q9C030 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM6Q9C030 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TRIM6Q9C030 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM6Q9C030 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM6Q9C030 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM6Q9C030 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC15.64■□□□□ 0.1
TRIM6Q9C030 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM6Q9C030 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.64■□□□□ 0.09
TRIM6Q9C030 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM6Q9C030 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM6Q9C030 TP73-201ENST00000346387 4854 ntTSL 5 BASIC15.64■□□□□ 0.09
TRIM6Q9C030 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM6Q9C030 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM6Q9C030 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.64■□□□□ 0.09
TRIM6Q9C030 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM6Q9C030 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM6Q9C030 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM6Q9C030 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM6Q9C030 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM6Q9C030 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM6Q9C030 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM6Q9C030 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM6Q9C030 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM6Q9C030 AC026316.1-201ENST00000398900 414 ntBASIC15.64■□□□□ 0.09
TRIM6Q9C030 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC15.64■□□□□ 0.09
TRIM6Q9C030 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.64■□□□□ 0.09
TRIM6Q9C030 NOC2LP1-201ENST00000450578 752 ntBASIC15.64■□□□□ 0.09
TRIM6Q9C030 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM6Q9C030 CFL1-214ENST00000534769 758 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM6Q9C030 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC15.64■□□□□ 0.09
TRIM6Q9C030 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC15.64■□□□□ 0.09
TRIM6Q9C030 SKA2-205ENST00000580541 689 ntTSL 3 BASIC15.64■□□□□ 0.09
TRIM6Q9C030 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM6Q9C030 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
TRIM6Q9C030 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM6Q9C030 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRIM6Q9C030 SLC9A3P3-201ENST00000457608 2229 ntBASIC15.64■□□□□ 0.09
TRIM6Q9C030 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
TRIM6Q9C030 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.64■□□□□ 0.09
TRIM6Q9C030 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM6Q9C030 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM6Q9C030 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM6Q9C030 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.64■□□□□ 0.09
TRIM6Q9C030 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM6Q9C030 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.64■□□□□ 0.09
TRIM6Q9C030 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.64■□□□□ 0.09
TRIM6Q9C030 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TRIM6Q9C030 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM6Q9C030 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.63■□□□□ 0.09
TRIM6Q9C030 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM6Q9C030 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM6Q9C030 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM6Q9C030 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRIM6Q9C030 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM6Q9C030 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM6Q9C030 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
TRIM6Q9C030 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM6Q9C030 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM6Q9C030 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms