Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RFT1Q96AA3 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.64□□□□□ -0.39
RFT1Q96AA3 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RFT1Q96AA3 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RFT1Q96AA3 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RFT1Q96AA3 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RFT1Q96AA3 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RFT1Q96AA3 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
RFT1Q96AA3 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
RFT1Q96AA3 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.64□□□□□ -0.39
RFT1Q96AA3 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RFT1Q96AA3 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RFT1Q96AA3 AC107375.1-201ENST00000564464 2231 ntBASIC12.64□□□□□ -0.39
RFT1Q96AA3 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RFT1Q96AA3 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
RFT1Q96AA3 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RFT1Q96AA3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RFT1Q96AA3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RFT1Q96AA3 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RFT1Q96AA3 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RFT1Q96AA3 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.64□□□□□ -0.39
RFT1Q96AA3 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.64□□□□□ -0.39
RFT1Q96AA3 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.64□□□□□ -0.39
RFT1Q96AA3 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RFT1Q96AA3 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.64□□□□□ -0.39
RFT1Q96AA3 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC12.64□□□□□ -0.39
RFT1Q96AA3 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12.64□□□□□ -0.39
RFT1Q96AA3 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
RFT1Q96AA3 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC12.64□□□□□ -0.39
RFT1Q96AA3 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC12.64□□□□□ -0.39
RFT1Q96AA3 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC12.64□□□□□ -0.39
RFT1Q96AA3 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC12.64□□□□□ -0.39
RFT1Q96AA3 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC12.64□□□□□ -0.39
RFT1Q96AA3 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.64□□□□□ -0.39
RFT1Q96AA3 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC12.64□□□□□ -0.39
RFT1Q96AA3 AC190387.1-201ENST00000551683 408 ntBASIC12.64□□□□□ -0.39
RFT1Q96AA3 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC12.64□□□□□ -0.39
RFT1Q96AA3 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.64□□□□□ -0.39
RFT1Q96AA3 AC009486.1-201ENST00000569860 813 ntBASIC12.64□□□□□ -0.39
RFT1Q96AA3 AC138696.2-201ENST00000607376 223 ntBASIC12.64□□□□□ -0.39
RFT1Q96AA3 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RFT1Q96AA3 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.64□□□□□ -0.39
RFT1Q96AA3 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RFT1Q96AA3 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RFT1Q96AA3 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
RFT1Q96AA3 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC12.64□□□□□ -0.39
RFT1Q96AA3 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
RFT1Q96AA3 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RFT1Q96AA3 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.64□□□□□ -0.39
RFT1Q96AA3 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RFT1Q96AA3 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RFT1Q96AA3 LINC02486-201ENST00000604157 3000 ntBASIC12.64□□□□□ -0.39
RFT1Q96AA3 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
RFT1Q96AA3 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RFT1Q96AA3 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC12.64□□□□□ -0.39
RFT1Q96AA3 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
RFT1Q96AA3 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RFT1Q96AA3 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
RFT1Q96AA3 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RFT1Q96AA3 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RFT1Q96AA3 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.63□□□□□ -0.39
RFT1Q96AA3 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
RFT1Q96AA3 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RFT1Q96AA3 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RFT1Q96AA3 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RFT1Q96AA3 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RFT1Q96AA3 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RFT1Q96AA3 AC009093.2-202ENST00000620513 2079 ntBASIC12.63□□□□□ -0.39
RFT1Q96AA3 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RFT1Q96AA3 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RFT1Q96AA3 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RFT1Q96AA3 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.63□□□□□ -0.39
RFT1Q96AA3 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.63□□□□□ -0.39
RFT1Q96AA3 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
RFT1Q96AA3 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RFT1Q96AA3 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RFT1Q96AA3 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
RFT1Q96AA3 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RFT1Q96AA3 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RFT1Q96AA3 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RFT1Q96AA3 NSL1-201ENST00000366976 722 ntTSL 2 BASIC12.63□□□□□ -0.39
RFT1Q96AA3 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC12.63□□□□□ -0.39
RFT1Q96AA3 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RFT1Q96AA3 POM121L8P-201ENST00000417732 1281 ntBASIC12.63□□□□□ -0.39
RFT1Q96AA3 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC12.63□□□□□ -0.39
RFT1Q96AA3 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.63□□□□□ -0.39
RFT1Q96AA3 POM121L9P-203ENST00000441984 1285 ntBASIC12.63□□□□□ -0.39
RFT1Q96AA3 AC002472.2-201ENST00000442739 958 ntBASIC12.63□□□□□ -0.39
RFT1Q96AA3 FAM207CP-201ENST00000443486 507 ntBASIC12.63□□□□□ -0.39
RFT1Q96AA3 BCRP1-201ENST00000444246 691 ntBASIC12.63□□□□□ -0.39
RFT1Q96AA3 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RFT1Q96AA3 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC12.63□□□□□ -0.39
RFT1Q96AA3 AL391280.1-201ENST00000506969 1062 ntBASIC12.63□□□□□ -0.39
RFT1Q96AA3 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RFT1Q96AA3 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
RFT1Q96AA3 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC12.63□□□□□ -0.39
RFT1Q96AA3 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.63□□□□□ -0.39
RFT1Q96AA3 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC12.63□□□□□ -0.39
RFT1Q96AA3 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC12.63□□□□□ -0.39
RFT1Q96AA3 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms