Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
TMEM54Q969K7 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
TMEM54Q969K7 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC12.44□□□□□ -0.42
TMEM54Q969K7 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM54Q969K7 KRT8P31-201ENST00000504812 1408 ntBASIC12.44□□□□□ -0.42
TMEM54Q969K7 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM54Q969K7 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM54Q969K7 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM54Q969K7 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM54Q969K7 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM54Q969K7 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC12.44□□□□□ -0.42
TMEM54Q969K7 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM54Q969K7 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM54Q969K7 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.44□□□□□ -0.42
TMEM54Q969K7 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC12.43□□□□□ -0.42
TMEM54Q969K7 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TMEM54Q969K7 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TMEM54Q969K7 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TMEM54Q969K7 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TMEM54Q969K7 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TMEM54Q969K7 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
TMEM54Q969K7 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
TMEM54Q969K7 AC135782.3-201ENST00000562782 2105 ntBASIC12.43□□□□□ -0.42
TMEM54Q969K7 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
TMEM54Q969K7 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TMEM54Q969K7 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TMEM54Q969K7 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC12.43□□□□□ -0.42
TMEM54Q969K7 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.43□□□□□ -0.42
TMEM54Q969K7 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.43□□□□□ -0.42
TMEM54Q969K7 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TMEM54Q969K7 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
TMEM54Q969K7 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TMEM54Q969K7 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TMEM54Q969K7 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TMEM54Q969K7 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TMEM54Q969K7 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
TMEM54Q969K7 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TMEM54Q969K7 PDIA3P2-201ENST00000428073 158 ntBASIC12.43□□□□□ -0.42
TMEM54Q969K7 DNAJB1P1-201ENST00000429417 1024 ntBASIC12.43□□□□□ -0.42
TMEM54Q969K7 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC12.43□□□□□ -0.42
TMEM54Q969K7 Z97180.1-201ENST00000445173 988 ntBASIC12.43□□□□□ -0.42
TMEM54Q969K7 AC005077.2-201ENST00000449786 690 ntBASIC12.43□□□□□ -0.42
TMEM54Q969K7 RN7SL258P-201ENST00000478664 300 ntBASIC12.43□□□□□ -0.42
TMEM54Q969K7 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC12.43□□□□□ -0.42
TMEM54Q969K7 AC114947.1-202ENST00000514136 344 ntBASIC12.43□□□□□ -0.42
TMEM54Q969K7 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
TMEM54Q969K7 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TMEM54Q969K7 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TMEM54Q969K7 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
TMEM54Q969K7 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
TMEM54Q969K7 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
TMEM54Q969K7 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC12.43□□□□□ -0.42
TMEM54Q969K7 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC12.43□□□□□ -0.42
TMEM54Q969K7 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC12.43□□□□□ -0.42
TMEM54Q969K7 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
TMEM54Q969K7 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC12.43□□□□□ -0.42
TMEM54Q969K7 MIR6787-201ENST00000616675 61 ntBASIC12.43□□□□□ -0.42
TMEM54Q969K7 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TMEM54Q969K7 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TMEM54Q969K7 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.43□□□□□ -0.42
TMEM54Q969K7 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TMEM54Q969K7 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TMEM54Q969K7 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TMEM54Q969K7 AL359845.1-201ENST00000458202 1648 ntBASIC12.43□□□□□ -0.42
TMEM54Q969K7 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
TMEM54Q969K7 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TMEM54Q969K7 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TMEM54Q969K7 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.43□□□□□ -0.42
TMEM54Q969K7 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.43□□□□□ -0.42
TMEM54Q969K7 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.43□□□□□ -0.42
TMEM54Q969K7 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC12.43□□□□□ -0.42
TMEM54Q969K7 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
TMEM54Q969K7 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TMEM54Q969K7 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TMEM54Q969K7 CICP4-201ENST00000447359 2812 ntBASIC12.43□□□□□ -0.42
TMEM54Q969K7 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TMEM54Q969K7 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TMEM54Q969K7 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TMEM54Q969K7 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
TMEM54Q969K7 AL133338.1-201ENST00000565695 1517 ntBASIC12.42□□□□□ -0.42
TMEM54Q969K7 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TMEM54Q969K7 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.42□□□□□ -0.42
TMEM54Q969K7 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
TMEM54Q969K7 AL591122.2-201ENST00000624125 1853 ntBASIC12.42□□□□□ -0.42
TMEM54Q969K7 KRT18P9-201ENST00000604826 1300 ntBASIC12.42□□□□□ -0.42
TMEM54Q969K7 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TMEM54Q969K7 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TMEM54Q969K7 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
TMEM54Q969K7 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
TMEM54Q969K7 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
TMEM54Q969K7 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
TMEM54Q969K7 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.42□□□□□ -0.42
TMEM54Q969K7 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TMEM54Q969K7 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TMEM54Q969K7 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.42□□□□□ -0.42
TMEM54Q969K7 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.42□□□□□ -0.42
TMEM54Q969K7 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
TMEM54Q969K7 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.42□□□□□ -0.42
TMEM54Q969K7 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TMEM54Q969K7 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms