Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
STAG1Q8WVM7 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
STAG1Q8WVM7 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
STAG1Q8WVM7 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
STAG1Q8WVM7 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
STAG1Q8WVM7 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC16.59■□□□□ 0.25
STAG1Q8WVM7 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC16.59■□□□□ 0.25
STAG1Q8WVM7 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
STAG1Q8WVM7 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
STAG1Q8WVM7 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
STAG1Q8WVM7 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC16.59■□□□□ 0.25
STAG1Q8WVM7 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC16.59■□□□□ 0.25
STAG1Q8WVM7 HPGD-203ENST00000422112 805 ntTSL 2 BASIC16.59■□□□□ 0.25
STAG1Q8WVM7 AL627422.1-201ENST00000434104 580 ntBASIC16.59■□□□□ 0.25
STAG1Q8WVM7 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
STAG1Q8WVM7 AC018638.5-201ENST00000450885 754 ntBASIC16.59■□□□□ 0.25
STAG1Q8WVM7 CHCHD2P9-201ENST00000461726 456 ntBASIC16.59■□□□□ 0.25
STAG1Q8WVM7 RN7SL181P-201ENST00000462921 277 ntBASIC16.59■□□□□ 0.25
STAG1Q8WVM7 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
STAG1Q8WVM7 AC145285.5-201ENST00000562217 361 ntBASIC16.59■□□□□ 0.25
STAG1Q8WVM7 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
STAG1Q8WVM7 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.59■□□□□ 0.25
STAG1Q8WVM7 OR2I1P-210ENST00000642037 4691 ntBASIC16.59■□□□□ 0.25
STAG1Q8WVM7 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC16.59■□□□□ 0.25
STAG1Q8WVM7 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC16.59■□□□□ 0.25
STAG1Q8WVM7 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
STAG1Q8WVM7 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.59■□□□□ 0.25
STAG1Q8WVM7 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
STAG1Q8WVM7 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
STAG1Q8WVM7 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
STAG1Q8WVM7 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
STAG1Q8WVM7 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
STAG1Q8WVM7 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
STAG1Q8WVM7 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.59■□□□□ 0.25
STAG1Q8WVM7 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
STAG1Q8WVM7 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
STAG1Q8WVM7 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
STAG1Q8WVM7 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
STAG1Q8WVM7 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
STAG1Q8WVM7 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
STAG1Q8WVM7 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
STAG1Q8WVM7 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
STAG1Q8WVM7 BEND3P1-201ENST00000421591 1944 ntBASIC16.58■□□□□ 0.25
STAG1Q8WVM7 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC16.58■□□□□ 0.25
STAG1Q8WVM7 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
STAG1Q8WVM7 USP31-203ENST00000567975 2142 ntTSL 2 BASIC16.58■□□□□ 0.25
STAG1Q8WVM7 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC16.58■□□□□ 0.25
STAG1Q8WVM7 AC072061.1-201ENST00000569710 2234 ntBASIC16.58■□□□□ 0.25
STAG1Q8WVM7 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.25
STAG1Q8WVM7 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
STAG1Q8WVM7 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
STAG1Q8WVM7 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
STAG1Q8WVM7 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
STAG1Q8WVM7 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
STAG1Q8WVM7 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
STAG1Q8WVM7 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
STAG1Q8WVM7 SOD2-202ENST00000367054 815 ntTSL 2 BASIC16.58■□□□□ 0.24
STAG1Q8WVM7 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
STAG1Q8WVM7 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.58■□□□□ 0.24
STAG1Q8WVM7 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC16.58■□□□□ 0.24
STAG1Q8WVM7 SCARNA12-201ENST00000459155 270 ntBASIC16.58■□□□□ 0.24
STAG1Q8WVM7 CD81-209ENST00000492627 886 ntTSL 3 BASIC16.58■□□□□ 0.24
STAG1Q8WVM7 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC16.58■□□□□ 0.24
STAG1Q8WVM7 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
STAG1Q8WVM7 AL031713.1-201ENST00000564813 661 ntBASIC16.58■□□□□ 0.24
STAG1Q8WVM7 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC16.58■□□□□ 0.24
STAG1Q8WVM7 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.58■□□□□ 0.24
STAG1Q8WVM7 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC16.58■□□□□ 0.24
STAG1Q8WVM7 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
STAG1Q8WVM7 AC087045.2-201ENST00000606279 1003 ntBASIC16.58■□□□□ 0.24
STAG1Q8WVM7 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC16.58■□□□□ 0.24
STAG1Q8WVM7 COX6A1P2-201ENST00000620597 330 ntBASIC16.58■□□□□ 0.24
STAG1Q8WVM7 YRDCP1-201ENST00000621419 643 ntBASIC16.58■□□□□ 0.24
STAG1Q8WVM7 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC16.58■□□□□ 0.24
STAG1Q8WVM7 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
STAG1Q8WVM7 AL139424.3-202ENST00000641619 917 ntBASIC16.58■□□□□ 0.24
STAG1Q8WVM7 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.58■□□□□ 0.24
STAG1Q8WVM7 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
STAG1Q8WVM7 AC138761.6-201ENST00000583997 1423 ntBASIC16.58■□□□□ 0.24
STAG1Q8WVM7 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
STAG1Q8WVM7 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC16.58■□□□□ 0.24
STAG1Q8WVM7 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
STAG1Q8WVM7 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC16.58■□□□□ 0.24
STAG1Q8WVM7 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
STAG1Q8WVM7 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC16.58■□□□□ 0.24
STAG1Q8WVM7 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC16.58■□□□□ 0.24
STAG1Q8WVM7 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC16.58■□□□□ 0.24
STAG1Q8WVM7 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
STAG1Q8WVM7 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
STAG1Q8WVM7 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
STAG1Q8WVM7 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
STAG1Q8WVM7 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
STAG1Q8WVM7 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
STAG1Q8WVM7 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
STAG1Q8WVM7 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
STAG1Q8WVM7 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms