Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 AC026320.2-201ENST00000434379 478 ntBASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 AC008723.1-201ENST00000506922 207 ntBASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 RNA5SP423-201ENST00000517127 109 ntBASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 IGLV3-15-201ENST00000518356 244 ntBASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 AC026803.1-201ENST00000569130 274 ntBASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 MIR3907-201ENST00000579424 151 ntBASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 LINC01783-202ENST00000614408 828 ntBASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 BX284668.2-205ENST00000619677 828 ntBASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 TBC1D3J-201ENST00000620719 1426 ntBASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
RFWD3Q6PCD5 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 CCT8L1P-201ENST00000465400 1674 ntBASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 CEP164P1-201ENST00000455142 418 ntBASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 AC093752.3-201ENST00000567343 901 ntBASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 PHBP15-201ENST00000574228 665 ntBASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 AL022313.4-201ENST00000562756 2046 ntBASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 CAP2P1-201ENST00000557743 1390 ntBASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
RFWD3Q6PCD5 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
RFWD3Q6PCD5 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms