Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12.94□□□□□ -0.34
CXCR4P61073 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC12.94□□□□□ -0.34
CXCR4P61073 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC12.94□□□□□ -0.34
CXCR4P61073 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.94□□□□□ -0.34
CXCR4P61073 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
CXCR4P61073 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CXCR4P61073 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CXCR4P61073 MSTO2P-201ENST00000314835 1709 ntBASIC12.94□□□□□ -0.34
CXCR4P61073 HSPA8P9-201ENST00000485881 1943 ntBASIC12.94□□□□□ -0.34
CXCR4P61073 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CXCR4P61073 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CXCR4P61073 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CXCR4P61073 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CXCR4P61073 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CXCR4P61073 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CXCR4P61073 AC018445.4-201ENST00000624066 2291 ntBASIC12.94□□□□□ -0.34
CXCR4P61073 AC009093.2-202ENST00000620513 2079 ntBASIC12.94□□□□□ -0.34
CXCR4P61073 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CXCR4P61073 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
CXCR4P61073 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CXCR4P61073 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CXCR4P61073 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
CXCR4P61073 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
CXCR4P61073 AL035414.1-201ENST00000451327 857 ntBASIC12.94□□□□□ -0.34
CXCR4P61073 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CXCR4P61073 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CXCR4P61073 AL391280.1-201ENST00000506969 1062 ntBASIC12.94□□□□□ -0.34
CXCR4P61073 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.94□□□□□ -0.34
CXCR4P61073 AC068587.3-201ENST00000526613 355 ntBASIC12.94□□□□□ -0.34
CXCR4P61073 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC12.94□□□□□ -0.34
CXCR4P61073 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.94□□□□□ -0.34
CXCR4P61073 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.94□□□□□ -0.34
CXCR4P61073 PAM16-204ENST00000571941 674 ntTSL 3 BASIC12.94□□□□□ -0.34
CXCR4P61073 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.94□□□□□ -0.34
CXCR4P61073 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.94□□□□□ -0.34
CXCR4P61073 AC004233.3-201ENST00000607794 1269 ntBASIC12.94□□□□□ -0.34
CXCR4P61073 AC145423.3-201ENST00000615987 467 ntBASIC12.94□□□□□ -0.34
CXCR4P61073 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CXCR4P61073 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CXCR4P61073 FAM90A11P-201ENST00000518378 2218 ntBASIC12.94□□□□□ -0.34
CXCR4P61073 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CXCR4P61073 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CXCR4P61073 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CXCR4P61073 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
CXCR4P61073 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC12.94□□□□□ -0.34
CXCR4P61073 BX324167.2-201ENST00000623717 3316 ntBASIC12.94□□□□□ -0.34
CXCR4P61073 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CXCR4P61073 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CXCR4P61073 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CXCR4P61073 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CXCR4P61073 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CXCR4P61073 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.94□□□□□ -0.34
CXCR4P61073 AC012531.1-201ENST00000562848 2680 ntBASIC12.94□□□□□ -0.34
CXCR4P61073 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC12.94□□□□□ -0.34
CXCR4P61073 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CXCR4P61073 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CXCR4P61073 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CXCR4P61073 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CXCR4P61073 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC12.93□□□□□ -0.34
CXCR4P61073 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
CXCR4P61073 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CXCR4P61073 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CXCR4P61073 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CXCR4P61073 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CXCR4P61073 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CXCR4P61073 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CXCR4P61073 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.93□□□□□ -0.34
CXCR4P61073 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CXCR4P61073 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CXCR4P61073 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CXCR4P61073 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CXCR4P61073 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CXCR4P61073 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CXCR4P61073 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CXCR4P61073 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CXCR4P61073 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.93□□□□□ -0.34
CXCR4P61073 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.93□□□□□ -0.34
CXCR4P61073 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CXCR4P61073 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.93□□□□□ -0.34
CXCR4P61073 HMGA1P1-201ENST00000415560 1062 ntBASIC12.93□□□□□ -0.34
CXCR4P61073 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.93□□□□□ -0.34
CXCR4P61073 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC12.93□□□□□ -0.34
CXCR4P61073 AC011495.1-201ENST00000498085 584 ntBASIC12.93□□□□□ -0.34
CXCR4P61073 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.93□□□□□ -0.34
CXCR4P61073 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.93□□□□□ -0.34
CXCR4P61073 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.93□□□□□ -0.34
CXCR4P61073 CTBP2P3-201ENST00000585629 1255 ntBASIC12.93□□□□□ -0.34
CXCR4P61073 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CXCR4P61073 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC12.93□□□□□ -0.34
CXCR4P61073 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.93□□□□□ -0.34
CXCR4P61073 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
CXCR4P61073 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CXCR4P61073 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CXCR4P61073 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC12.93□□□□□ -0.34
CXCR4P61073 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.93□□□□□ -0.34
CXCR4P61073 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CXCR4P61073 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CXCR4P61073 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CXCR4P61073 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CXCR4P61073 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms