Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERVFC1P60507 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ERVFC1P60507 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERVFC1P60507 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.72□□□□□ -0.05
ERVFC1P60507 AC113367.3-201ENST00000508316 1912 ntBASIC14.72□□□□□ -0.05
ERVFC1P60507 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERVFC1P60507 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.72□□□□□ -0.05
ERVFC1P60507 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERVFC1P60507 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERVFC1P60507 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC14.72□□□□□ -0.05
ERVFC1P60507 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERVFC1P60507 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERVFC1P60507 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ERVFC1P60507 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
ERVFC1P60507 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERVFC1P60507 AC012617.1-204ENST00000586340 2305 ntBASIC14.71□□□□□ -0.05
ERVFC1P60507 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERVFC1P60507 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERVFC1P60507 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ERVFC1P60507 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERVFC1P60507 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERVFC1P60507 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERVFC1P60507 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERVFC1P60507 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.71□□□□□ -0.05
ERVFC1P60507 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
ERVFC1P60507 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
ERVFC1P60507 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERVFC1P60507 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
ERVFC1P60507 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERVFC1P60507 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERVFC1P60507 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERVFC1P60507 RPL10-203ENST00000406022 748 ntTSL 3 BASIC14.71□□□□□ -0.05
ERVFC1P60507 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC14.71□□□□□ -0.05
ERVFC1P60507 AC092810.2-201ENST00000431570 362 ntBASIC14.71□□□□□ -0.05
ERVFC1P60507 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
ERVFC1P60507 AC027612.2-202ENST00000445955 1199 ntBASIC14.71□□□□□ -0.05
ERVFC1P60507 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
ERVFC1P60507 RPS18P9-201ENST00000482817 460 ntBASIC14.71□□□□□ -0.05
ERVFC1P60507 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC14.71□□□□□ -0.05
ERVFC1P60507 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC14.71□□□□□ -0.05
ERVFC1P60507 AC091304.3-201ENST00000566500 716 ntBASIC14.71□□□□□ -0.05
ERVFC1P60507 AC113385.2-201ENST00000614465 762 ntBASIC14.71□□□□□ -0.05
ERVFC1P60507 GARS-210ENST00000627489 324 ntTSL 4 BASIC14.71□□□□□ -0.05
ERVFC1P60507 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ERVFC1P60507 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERVFC1P60507 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
ERVFC1P60507 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERVFC1P60507 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
ERVFC1P60507 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
ERVFC1P60507 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ERVFC1P60507 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
ERVFC1P60507 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERVFC1P60507 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
ERVFC1P60507 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ERVFC1P60507 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.71□□□□□ -0.05
ERVFC1P60507 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ERVFC1P60507 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
ERVFC1P60507 AP002414.2-201ENST00000591780 3365 ntBASIC14.71□□□□□ -0.06
ERVFC1P60507 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC14.71□□□□□ -0.06
ERVFC1P60507 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
ERVFC1P60507 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
ERVFC1P60507 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
ERVFC1P60507 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.71□□□□□ -0.06
ERVFC1P60507 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
ERVFC1P60507 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
ERVFC1P60507 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.7□□□□□ -0.06
ERVFC1P60507 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
ERVFC1P60507 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ERVFC1P60507 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.7□□□□□ -0.06
ERVFC1P60507 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
ERVFC1P60507 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
ERVFC1P60507 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ERVFC1P60507 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
ERVFC1P60507 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
ERVFC1P60507 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ERVFC1P60507 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ERVFC1P60507 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.7□□□□□ -0.06
ERVFC1P60507 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ERVFC1P60507 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ERVFC1P60507 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
ERVFC1P60507 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
ERVFC1P60507 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.7□□□□□ -0.06
ERVFC1P60507 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ERVFC1P60507 AC023141.7-201ENST00000430646 407 ntBASIC14.7□□□□□ -0.06
ERVFC1P60507 AC005722.1-201ENST00000431878 964 ntBASIC14.7□□□□□ -0.06
ERVFC1P60507 RPSAP12-201ENST00000435879 888 ntBASIC14.7□□□□□ -0.06
ERVFC1P60507 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC14.7□□□□□ -0.06
ERVFC1P60507 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC14.7□□□□□ -0.06
ERVFC1P60507 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ERVFC1P60507 CSTP2-201ENST00000610599 398 ntBASIC14.7□□□□□ -0.06
ERVFC1P60507 AC010531.8-201ENST00000623341 685 ntBASIC14.7□□□□□ -0.06
ERVFC1P60507 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
ERVFC1P60507 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ERVFC1P60507 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
ERVFC1P60507 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ERVFC1P60507 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
ERVFC1P60507 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ERVFC1P60507 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.7□□□□□ -0.06
ERVFC1P60507 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
ERVFC1P60507 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms