Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TPM3P06753 AL391825.1-201ENST00000457671 1364 ntBASIC15.97■□□□□ 0.15
TPM3P06753 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
TPM3P06753 LINC02486-201ENST00000604157 3000 ntBASIC15.97■□□□□ 0.15
TPM3P06753 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.97■□□□□ 0.15
TPM3P06753 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
TPM3P06753 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC15.97■□□□□ 0.15
TPM3P06753 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC15.97■□□□□ 0.15
TPM3P06753 C2-209ENST00000452323 1999 ntTSL 2 BASIC15.96■□□□□ 0.15
TPM3P06753 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TPM3P06753 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TPM3P06753 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TPM3P06753 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.96■□□□□ 0.15
TPM3P06753 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
TPM3P06753 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TPM3P06753 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TPM3P06753 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TPM3P06753 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC15.96■□□□□ 0.15
TPM3P06753 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TPM3P06753 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC15.96■□□□□ 0.15
TPM3P06753 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TPM3P06753 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TPM3P06753 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
TPM3P06753 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TPM3P06753 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.96■□□□□ 0.15
TPM3P06753 AL035414.1-201ENST00000451327 857 ntBASIC15.96■□□□□ 0.15
TPM3P06753 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
TPM3P06753 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.96■□□□□ 0.15
TPM3P06753 RN7SL48P-201ENST00000579283 293 ntBASIC15.96■□□□□ 0.15
TPM3P06753 AL691403.2-201ENST00000618460 490 ntBASIC15.96■□□□□ 0.15
TPM3P06753 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.96■□□□□ 0.15
TPM3P06753 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TPM3P06753 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TPM3P06753 TNRC18P1-201ENST00000502875 3650 ntBASIC15.96■□□□□ 0.15
TPM3P06753 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TPM3P06753 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TPM3P06753 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
TPM3P06753 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TPM3P06753 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TPM3P06753 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC15.96■□□□□ 0.15
TPM3P06753 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TPM3P06753 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TPM3P06753 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TPM3P06753 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TPM3P06753 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TPM3P06753 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.95■□□□□ 0.14
TPM3P06753 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.95■□□□□ 0.14
TPM3P06753 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC15.95■□□□□ 0.14
TPM3P06753 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC15.95■□□□□ 0.14
TPM3P06753 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TPM3P06753 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC15.95■□□□□ 0.14
TPM3P06753 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TPM3P06753 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC15.95■□□□□ 0.14
TPM3P06753 AC106818.1-201ENST00000623223 3242 ntBASIC15.95■□□□□ 0.14
TPM3P06753 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TPM3P06753 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TPM3P06753 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC15.95■□□□□ 0.14
TPM3P06753 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC15.95■□□□□ 0.14
TPM3P06753 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
TPM3P06753 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.95■□□□□ 0.14
TPM3P06753 RN7SKP175-201ENST00000408472 289 ntBASIC15.95■□□□□ 0.14
TPM3P06753 MRPS18AP1-201ENST00000414458 589 ntBASIC15.95■□□□□ 0.14
TPM3P06753 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TPM3P06753 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.95■□□□□ 0.14
TPM3P06753 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.95■□□□□ 0.14
TPM3P06753 AC011495.1-201ENST00000498085 584 ntBASIC15.95■□□□□ 0.14
TPM3P06753 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
TPM3P06753 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.95■□□□□ 0.14
TPM3P06753 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
TPM3P06753 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.95■□□□□ 0.14
TPM3P06753 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.95■□□□□ 0.14
TPM3P06753 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.95■□□□□ 0.14
TPM3P06753 AC002472.3-201ENST00000640124 621 ntBASIC15.95■□□□□ 0.14
TPM3P06753 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
TPM3P06753 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC15.95■□□□□ 0.14
TPM3P06753 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TPM3P06753 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TPM3P06753 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TPM3P06753 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
TPM3P06753 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.95■□□□□ 0.14
TPM3P06753 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.95■□□□□ 0.14
TPM3P06753 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TPM3P06753 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TPM3P06753 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TPM3P06753 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TPM3P06753 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TPM3P06753 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TPM3P06753 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
TPM3P06753 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC15.94■□□□□ 0.14
TPM3P06753 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TPM3P06753 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TPM3P06753 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC15.94■□□□□ 0.14
TPM3P06753 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.94■□□□□ 0.14
TPM3P06753 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TPM3P06753 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TPM3P06753 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TPM3P06753 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC15.94■□□□□ 0.14
TPM3P06753 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
TPM3P06753 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC15.94■□□□□ 0.14
TPM3P06753 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms