Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
APOC1P02654 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
APOC1P02654 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
APOC1P02654 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC1P02654 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC1P02654 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
APOC1P02654 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC1P02654 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
APOC1P02654 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
APOC1P02654 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC1P02654 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
APOC1P02654 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
APOC1P02654 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC1P02654 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
APOC1P02654 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
APOC1P02654 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.65□□□□□ -0.38
APOC1P02654 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
APOC1P02654 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.65□□□□□ -0.38
APOC1P02654 TMEM14DP-201ENST00000422205 345 ntBASIC12.65□□□□□ -0.38
APOC1P02654 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC12.65□□□□□ -0.38
APOC1P02654 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC12.65□□□□□ -0.38
APOC1P02654 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
APOC1P02654 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
APOC1P02654 TAF8-206ENST00000472818 719 ntTSL 2 BASIC12.65□□□□□ -0.38
APOC1P02654 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC12.65□□□□□ -0.38
APOC1P02654 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC12.65□□□□□ -0.38
APOC1P02654 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC1P02654 RBM8B-201ENST00000555532 525 ntBASIC12.65□□□□□ -0.38
APOC1P02654 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.65□□□□□ -0.38
APOC1P02654 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
APOC1P02654 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC1P02654 AC019294.4-201ENST00000561777 2905 ntBASIC12.65□□□□□ -0.38
APOC1P02654 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
APOC1P02654 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
APOC1P02654 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
APOC1P02654 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC1P02654 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.65□□□□□ -0.38
APOC1P02654 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC1P02654 AC105206.1-202ENST00000314927 2368 ntBASIC12.65□□□□□ -0.38
APOC1P02654 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
APOC1P02654 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
APOC1P02654 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC12.65□□□□□ -0.38
APOC1P02654 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC1P02654 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC1P02654 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
APOC1P02654 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
APOC1P02654 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
APOC1P02654 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
APOC1P02654 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
APOC1P02654 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC1P02654 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
APOC1P02654 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC12.64□□□□□ -0.39
APOC1P02654 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC1P02654 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC1P02654 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
APOC1P02654 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC1P02654 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
APOC1P02654 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC1P02654 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC1P02654 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.64□□□□□ -0.39
APOC1P02654 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC1P02654 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
APOC1P02654 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.64□□□□□ -0.39
APOC1P02654 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
APOC1P02654 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC1P02654 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC1P02654 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
APOC1P02654 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC1P02654 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC1P02654 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
APOC1P02654 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC1P02654 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.64□□□□□ -0.39
APOC1P02654 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
APOC1P02654 AC079178.1-201ENST00000420915 656 ntBASIC12.64□□□□□ -0.39
APOC1P02654 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC12.64□□□□□ -0.39
APOC1P02654 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.64□□□□□ -0.39
APOC1P02654 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.64□□□□□ -0.39
APOC1P02654 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC12.64□□□□□ -0.39
APOC1P02654 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC12.64□□□□□ -0.39
APOC1P02654 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.64□□□□□ -0.39
APOC1P02654 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
APOC1P02654 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
APOC1P02654 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC12.64□□□□□ -0.39
APOC1P02654 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.64□□□□□ -0.39
APOC1P02654 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC1P02654 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC1P02654 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
APOC1P02654 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.64□□□□□ -0.39
APOC1P02654 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC1P02654 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.64□□□□□ -0.39
APOC1P02654 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
APOC1P02654 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC1P02654 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
APOC1P02654 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC1P02654 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC1P02654 LAP3P2-201ENST00000454686 1454 ntBASIC12.64□□□□□ -0.39
APOC1P02654 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
APOC1P02654 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC12.64□□□□□ -0.39
APOC1P02654 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
APOC1P02654 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms