Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN5O00501 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN5O00501 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC14.9□□□□□ -0.02
CLDN5O00501 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC14.9□□□□□ -0.02
CLDN5O00501 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLDN5O00501 AL365209.1-201ENST00000624418 6473 ntBASIC14.9□□□□□ -0.02
CLDN5O00501 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.9□□□□□ -0.02
CLDN5O00501 KRT8P24-201ENST00000560290 1559 ntBASIC14.9□□□□□ -0.02
CLDN5O00501 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN5O00501 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CLDN5O00501 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CLDN5O00501 RCC2P1-201ENST00000452257 1476 ntBASIC14.89□□□□□ -0.03
CLDN5O00501 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN5O00501 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN5O00501 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CLDN5O00501 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN5O00501 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN5O00501 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN5O00501 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN5O00501 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN5O00501 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.89□□□□□ -0.03
CLDN5O00501 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN5O00501 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.89□□□□□ -0.03
CLDN5O00501 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN5O00501 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN5O00501 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN5O00501 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC14.89□□□□□ -0.03
CLDN5O00501 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN5O00501 AL512306.1-201ENST00000432698 848 ntBASIC14.89□□□□□ -0.03
CLDN5O00501 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC14.89□□□□□ -0.03
CLDN5O00501 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC14.89□□□□□ -0.03
CLDN5O00501 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC14.89□□□□□ -0.03
CLDN5O00501 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN5O00501 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC14.89□□□□□ -0.03
CLDN5O00501 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN5O00501 RN7SL81P-201ENST00000493781 261 ntBASIC14.89□□□□□ -0.03
CLDN5O00501 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
CLDN5O00501 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC14.89□□□□□ -0.03
CLDN5O00501 AC138701.2-201ENST00000553634 226 ntBASIC14.89□□□□□ -0.03
CLDN5O00501 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC14.89□□□□□ -0.03
CLDN5O00501 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CLDN5O00501 AP001184.1-201ENST00000637936 376 ntBASIC14.89□□□□□ -0.03
CLDN5O00501 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN5O00501 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN5O00501 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN5O00501 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN5O00501 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.89□□□□□ -0.03
CLDN5O00501 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN5O00501 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC14.89□□□□□ -0.03
CLDN5O00501 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN5O00501 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN5O00501 AC067750.1-201ENST00000608826 6545 ntBASIC14.89□□□□□ -0.03
CLDN5O00501 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
CLDN5O00501 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
CLDN5O00501 ST20-AS1-201ENST00000560255 4223 ntBASIC14.89□□□□□ -0.03
CLDN5O00501 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN5O00501 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.89□□□□□ -0.03
CLDN5O00501 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN5O00501 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.89□□□□□ -0.03
CLDN5O00501 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN5O00501 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CLDN5O00501 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLDN5O00501 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.88□□□□□ -0.03
CLDN5O00501 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.88□□□□□ -0.03
CLDN5O00501 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CLDN5O00501 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN5O00501 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
CLDN5O00501 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
CLDN5O00501 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CLDN5O00501 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC14.88□□□□□ -0.03
CLDN5O00501 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN5O00501 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN5O00501 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN5O00501 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN5O00501 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.88□□□□□ -0.03
CLDN5O00501 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN5O00501 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN5O00501 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN5O00501 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN5O00501 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.88□□□□□ -0.03
CLDN5O00501 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN5O00501 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CLDN5O00501 PYY2-201ENST00000315776 282 ntBASIC14.88□□□□□ -0.03
CLDN5O00501 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN5O00501 HLA-DMA-203ENST00000395305 777 ntBASIC14.88□□□□□ -0.03
CLDN5O00501 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC14.88□□□□□ -0.03
CLDN5O00501 AC098934.1-203ENST00000442868 1262 ntBASIC14.88□□□□□ -0.03
CLDN5O00501 ERP29P1-201ENST00000442902 706 ntBASIC14.88□□□□□ -0.03
CLDN5O00501 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.88□□□□□ -0.03
CLDN5O00501 SCARNA12-201ENST00000459155 270 ntBASIC14.88□□□□□ -0.03
CLDN5O00501 RN7SL788P-201ENST00000460504 316 ntBASIC14.88□□□□□ -0.03
CLDN5O00501 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CLDN5O00501 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC14.88□□□□□ -0.03
CLDN5O00501 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC14.88□□□□□ -0.03
CLDN5O00501 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC14.88□□□□□ -0.03
CLDN5O00501 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC14.88□□□□□ -0.03
CLDN5O00501 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN5O00501 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CLDN5O00501 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC14.88□□□□□ -0.03
CLDN5O00501 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms