Protein–RNA interactions for Protein: A6NEF3

GOLGA6L4, Golgin subfamily A member 6-like protein 4, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GOLGA6L4A6NEF3 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 LINC00567-201ENST00000569854 3409 ntBASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
GOLGA6L4A6NEF3 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
GOLGA6L4A6NEF3 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC16.46■□□□□ 0.22
GOLGA6L4A6NEF3 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
GOLGA6L4A6NEF3 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 COX5BP1-201ENST00000507622 393 ntBASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 TP53TG3HP-202ENST00000569755 579 ntBASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 RN7SL204P-201ENST00000582831 262 ntBASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 PCDHA6-201ENST00000378126 3267 ntBASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 PDIA3P1-201ENST00000471856 1510 ntBASIC16.45■□□□□ 0.22
GOLGA6L4A6NEF3 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 PCDHB18P-202ENST00000526308 3197 ntBASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 INE1-201ENST00000456273 945 ntBASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 AP003171.2-201ENST00000528208 925 ntBASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 AC190387.1-201ENST00000551683 408 ntBASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 RN7SL713P-201ENST00000582127 302 ntBASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 AL358472.3-201ENST00000608147 415 ntBASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 AL136301.1-201ENST00000615830 422 ntBASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GOLGA6L4A6NEF3 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
GOLGA6L4A6NEF3 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms