Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 AL844908.2-201ENST00000609461 460 ntBASIC12.7□□□□□ -0.38
SSR3Q9UNL2 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 AC002472.3-201ENST00000640124 621 ntBASIC12.7□□□□□ -0.38
SSR3Q9UNL2 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSR3Q9UNL2 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 AC022364.1-202ENST00000617468 2409 ntBASIC12.69□□□□□ -0.38
SSR3Q9UNL2 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 AC134915.1-201ENST00000426461 574 ntBASIC12.69□□□□□ -0.38
SSR3Q9UNL2 GNAQP1-201ENST00000444815 1067 ntBASIC12.69□□□□□ -0.38
SSR3Q9UNL2 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 AC120045.2-201ENST00000567334 178 ntBASIC12.69□□□□□ -0.38
SSR3Q9UNL2 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 MIR4469-201ENST00000583919 79 ntBASIC12.69□□□□□ -0.38
SSR3Q9UNL2 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 BTBD7P1-201ENST00000447253 1453 ntBASIC12.69□□□□□ -0.38
SSR3Q9UNL2 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 AC025183.3-201ENST00000623526 1482 ntBASIC12.69□□□□□ -0.38
SSR3Q9UNL2 SALL4P6-201ENST00000429385 1691 ntBASIC12.69□□□□□ -0.38
SSR3Q9UNL2 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 INTS4P2-202ENST00000614726 2019 ntBASIC12.69□□□□□ -0.38
SSR3Q9UNL2 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
SSR3Q9UNL2 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms