Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 AC012617.1-204ENST00000586340 2305 ntBASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 RNA5SP359-201ENST00000364838 113 ntBASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 RPL17P11-201ENST00000417593 544 ntBASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 AP000358.1-201ENST00000456260 156 ntBASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 MIR3677-201ENST00000578964 60 ntBASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 RN7SL555P-201ENST00000584742 339 ntBASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 AC018635.2-201ENST00000608625 364 ntBASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 STRCP1-201ENST00000509801 5328 ntBASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.15□□□□□ -0.3
NPIPA1Q9UND3 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
NPIPA1Q9UND3 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.15□□□□□ -0.31
NPIPA1Q9UND3 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.31
NPIPA1Q9UND3 AC074138.1-201ENST00000611182 1303 ntBASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 AC011498.7-201ENST00000624986 2027 ntBASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 AC078991.1-201ENST00000437297 610 ntBASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 PGAM1P5-201ENST00000548011 764 ntBASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 SORD2P-201ENST00000558556 1069 ntBASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 TPM1-223ENST00000560445 485 ntTSL 3 BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 PHBP15-201ENST00000574228 665 ntBASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.14□□□□□ -0.31
NPIPA1Q9UND3 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms