Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 AL513497.1-201ENST00000624273 2083 ntBASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 RN7SL494P-201ENST00000461517 304 ntBASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 RN7SL582P-201ENST00000491078 279 ntBASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 USB1-205ENST00000561743 1135 ntTSL 3 BASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 C2orf69P1-201ENST00000563532 1093 ntBASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 AC008972.2-201ENST00000606587 494 ntBASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 FO393412.1-201ENST00000619841 382 ntBASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 LINC02228-204ENST00000642115 2962 ntBASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SYNPO2Q9UMS6 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 AC040160.2-201ENST00000623816 1675 ntBASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 KRT18P4-201ENST00000422599 1288 ntBASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 AC041040.1-201ENST00000425197 460 ntBASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 ASS1P2-201ENST00000439895 1223 ntBASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 BPIFB5P-201ENST00000457066 1099 ntBASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 RN7SL396P-201ENST00000471086 295 ntBASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 MIR6756-201ENST00000616240 63 ntBASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 AC073869.4-201ENST00000620841 800 ntBASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 AL928654.5-201ENST00000624831 2501 ntBASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 AC007686.3-201ENST00000619017 3487 ntBASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 AC245140.2-201ENST00000624054 1939 ntBASIC16.06■□□□□ 0.16
SYNPO2Q9UMS6 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SYNPO2Q9UMS6 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms